The 2.0 version of rSNPBase

Variant report

Variant rs10419700
Chromosome Location chr19:38508659-38508660
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38474800-38513600 Weak transcription Gastric stomach
2 chr19:38495400-38522800 Weak transcription Aorta Aorta
3 chr19:38495400-38526400 Weak transcription Ovary ovary
4 chr19:38495600-38509200 Weak transcription Rectal Smooth Muscle rectum
5 chr19:38495600-38512800 Weak transcription Duodenum Mucosa Duodenum
6 chr19:38495600-38513400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr19:38495600-38514200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr19:38495800-38510000 Weak transcription Primary monocytes fromperipheralblood blood
9 chr19:38495800-38513400 Weak transcription Stomach Mucosa stomach
10 chr19:38496200-38509400 Weak transcription HSMMtube muscle
11 chr19:38496200-38512600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:38496200-38513600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr19:38496200-38513600 Weak transcription Left Ventricle heart
14 chr19:38496200-38513600 Weak transcription Right Ventricle heart
15 chr19:38496200-38513600 Weak transcription NHEK skin
16 chr19:38496200-38521400 Weak transcription Stomach Smooth Muscle stomach
17 chr19:38496400-38510800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr19:38496400-38511000 Weak transcription Brain Germinal Matrix brain
19 chr19:38496400-38521400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr19:38496600-38513600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr19:38496600-38515600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr19:38496800-38509400 Weak transcription HUVEC blood vessel
23 chr19:38496800-38520600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr19:38497000-38513400 Weak transcription NHLF lung
25 chr19:38497400-38511800 Weak transcription NH-A brain
26 chr19:38497400-38515800 Weak transcription Fetal Brain Male brain
27 chr19:38497400-38520600 Weak transcription Primary T cells from cord blood blood
28 chr19:38497600-38513600 Weak transcription Muscle Satellite Cultured Cells --
29 chr19:38498200-38514800 Weak transcription HepG2 liver
30 chr19:38500600-38524200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr19:38501000-38521400 Weak transcription Thymus Thymus
32 chr19:38501800-38511000 Weak transcription HSMM muscle
33 chr19:38502400-38523000 Weak transcription Liver Liver
34 chr19:38502600-38512600 Weak transcription Pancreas Pancrea
35 chr19:38503000-38511000 Weak transcription Spleen Spleen
36 chr19:38503600-38513600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr19:38503800-38509800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr19:38503800-38509800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr19:38503800-38509800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr19:38503800-38509800 Weak transcription Lung lung
41 chr19:38503800-38511000 Weak transcription Fetal Muscle Trunk muscle
42 chr19:38503800-38511600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr19:38503800-38513400 Weak transcription Esophagus oesophagus
44 chr19:38503800-38513400 Weak transcription Fetal Intestine Large intestine
45 chr19:38503800-38523800 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr19:38504000-38510200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr19:38504000-38513200 Strong transcription Fetal Intestine Small intestine
48 chr19:38504000-38515200 Weak transcription H1 Cell Line embryonic stem cell
49 chr19:38504000-38515200 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr19:38504400-38512600 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015