Variant report
| Variant | rs10401835 |
|---|---|
| Chromosome Location | chr19:38584843-38584844 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:38539200-38591200 | Weak transcription | Small Intestine | intestine |
| 2 | chr19:38550800-38590000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr19:38551200-38613800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 4 | chr19:38565600-38588400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 5 | chr19:38567600-38605400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 6 | chr19:38568000-38590200 | Strong transcription | Fetal Intestine Small | intestine |
| 7 | chr19:38570800-38590200 | Weak transcription | Fetal Thymus | thymus |
| 8 | chr19:38571000-38590000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 9 | chr19:38571000-38590200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr19:38571200-38590200 | Weak transcription | HMEC | breast |
| 11 | chr19:38571200-38590200 | Weak transcription | NHEK | skin |
| 12 | chr19:38571400-38586000 | Strong transcription | A549 | lung |
| 13 | chr19:38571800-38585000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 14 | chr19:38571800-38585400 | Strong transcription | Fetal Stomach | stomach |
| 15 | chr19:38571800-38586000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 16 | chr19:38571800-38586600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr19:38572000-38585800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 18 | chr19:38572000-38586000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 19 | chr19:38572200-38585800 | Weak transcription | NHDF-Ad | bronchial |
| 20 | chr19:38573600-38586000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 21 | chr19:38573600-38590000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 22 | chr19:38573600-38610000 | Strong transcription | Fetal Intestine Large | intestine |
| 23 | chr19:38574000-38586000 | Weak transcription | NHLF | lung |
| 24 | chr19:38574000-38590000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 25 | chr19:38574000-38590200 | Weak transcription | Aorta | Aorta |
| 26 | chr19:38574000-38590600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 27 | chr19:38574200-38589600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 28 | chr19:38574200-38590200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 29 | chr19:38574200-38590200 | Weak transcription | HUVEC | blood vessel |
| 30 | chr19:38574400-38590000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr19:38575400-38586000 | Weak transcription | Placenta | Placenta |
| 32 | chr19:38576400-38590000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 33 | chr19:38577200-38585000 | Strong transcription | Primary B cells from cord blood | blood |
| 34 | chr19:38577200-38585600 | Strong transcription | Duodenum Mucosa | Duodenum |
| 35 | chr19:38577400-38586000 | Weak transcription | Fetal Kidney | kidney |
| 36 | chr19:38577600-38587000 | Strong transcription | Primary T cells from cord blood | blood |
| 37 | chr19:38578600-38585000 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr19:38579600-38586200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 39 | chr19:38579600-38590400 | Weak transcription | Esophagus | oesophagus |
| 40 | chr19:38579800-38590200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 41 | chr19:38579800-38590200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 42 | chr19:38580000-38585200 | Weak transcription | HepG2 | liver |
| 43 | chr19:38580000-38590600 | Weak transcription | Colon Smooth Muscle | Colon |
| 44 | chr19:38580200-38590000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 45 | chr19:38580400-38590400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 46 | chr19:38580400-38594800 | Weak transcription | HSMMtube | muscle |
| 47 | chr19:38580600-38585800 | Weak transcription | Fetal Brain Female | brain |
| 48 | chr19:38580600-38588000 | Weak transcription | NH-A | brain |
| 49 | chr19:38580600-38588600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 50 | chr19:38580600-38588600 | Weak transcription | HSMM | muscle |
