The 2.0 version of rSNPBase

Variant report

Variant rs28700884
Chromosome Location chr19:38596807-38596808
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38551200-38613800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr19:38567600-38605400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr19:38573600-38610000 Strong transcription Fetal Intestine Large intestine
4 chr19:38581600-38610000 Weak transcription Psoas Muscle Psoas
5 chr19:38584400-38597000 Weak transcription Right Atrium heart
6 chr19:38584800-38602400 Weak transcription Fetal Brain Male brain
7 chr19:38584800-38602400 Weak transcription Fetal Heart heart
8 chr19:38587000-38605400 Strong transcription Primary B cells from peripheral blood blood
9 chr19:38587200-38603200 Strong transcription Primary B cells from cord blood blood
10 chr19:38587200-38613600 Strong transcription Cortex derived primary cultured neurospheres brain
11 chr19:38587400-38613400 Strong transcription Duodenum Mucosa Duodenum
12 chr19:38588600-38597200 Strong transcription Osteobl bone
13 chr19:38588600-38604000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr19:38588800-38606600 Strong transcription Liver Liver
15 chr19:38589200-38606800 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr19:38590200-38597200 Strong transcription Gastric stomach
17 chr19:38590200-38605200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
18 chr19:38590200-38605800 Strong transcription Adipose Nuclei Adipose
19 chr19:38590200-38606600 Strong transcription Sigmoid Colon Sigmoid Colon
20 chr19:38590200-38606600 Strong transcription Stomach Smooth Muscle stomach
21 chr19:38590200-38611000 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr19:38590400-38599200 Strong transcription Pancreas Pancrea
23 chr19:38590400-38606400 Strong transcription Fetal Brain Female brain
24 chr19:38590400-38609800 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr19:38590800-38597200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr19:38590800-38602800 Strong transcription Spleen Spleen
27 chr19:38590800-38603600 Strong transcription Fetal Adrenal Gland Adrenal Gland
28 chr19:38590800-38603800 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr19:38590800-38606600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr19:38590800-38608800 Strong transcription Fetal Intestine Small intestine
31 chr19:38591000-38601800 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr19:38591000-38605000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr19:38591200-38597000 Weak transcription HUVEC blood vessel
34 chr19:38591200-38597200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr19:38591200-38597200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr19:38591200-38597200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr19:38591200-38597200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr19:38591200-38605400 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr19:38591200-38605400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr19:38591200-38605800 Strong transcription Primary neutrophils fromperipheralblood blood
41 chr19:38591400-38600800 Weak transcription Colon Smooth Muscle Colon
42 chr19:38591400-38603600 Strong transcription Primary monocytes fromperipheralblood blood
43 chr19:38591400-38605400 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr19:38591600-38597200 Strong transcription A549 lung
45 chr19:38591600-38597200 Weak transcription HMEC breast
46 chr19:38591600-38597400 Weak transcription NHDF-Ad bronchial
47 chr19:38591600-38600000 Weak transcription Placenta Amnion Placenta Amnion
48 chr19:38591600-38602600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr19:38591800-38609000 Strong transcription Fetal Stomach stomach
50 chr19:38591800-38642800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015