The 2.0 version of rSNPBase

Variant report

Variant rs10429911
Chromosome Location chr1:197146144-197146145
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197116400-197146200 Weak transcription Gastric stomach
2 chr1:197116400-197155000 Weak transcription Fetal Brain Male brain
3 chr1:197116600-197169800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:197121600-197154800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:197123800-197147600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:197124600-197155400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:197125200-197156000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:197125200-197156400 Weak transcription Right Ventricle heart
9 chr1:197125400-197155600 Weak transcription Fetal Stomach stomach
10 chr1:197125400-197156200 Weak transcription Pancreas Pancrea
11 chr1:197125400-197156400 Weak transcription Aorta Aorta
12 chr1:197125400-197156400 Weak transcription Lung lung
13 chr1:197125400-197168400 Weak transcription Psoas Muscle Psoas
14 chr1:197125600-197160000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:197125600-197169600 Weak transcription Esophagus oesophagus
16 chr1:197125800-197158400 Weak transcription Spleen Spleen
17 chr1:197126400-197169600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:197127000-197148200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:197128200-197161000 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr1:197128400-197157000 Weak transcription Colonic Mucosa Colon
21 chr1:197129000-197155400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:197129200-197149200 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:197130200-197148400 Weak transcription Ovary ovary
24 chr1:197130200-197149000 Weak transcription Brain Inferior Temporal Lobe brain
25 chr1:197130200-197156200 Weak transcription Rectal Smooth Muscle rectum
26 chr1:197132400-197148000 Weak transcription HSMMtube muscle
27 chr1:197132400-197154800 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:197132400-197156400 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:197134800-197148000 Strong transcription Primary monocytes fromperipheralblood blood
30 chr1:197135200-197161800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:197135400-197148200 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr1:197136000-197161600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr1:197136200-197148000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:197137000-197146600 Strong transcription HSMM muscle
35 chr1:197138000-197147400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:197139800-197150600 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr1:197139800-197151000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:197140200-197150600 Strong transcription Primary T helper cells PMA-I stimulated --
39 chr1:197140200-197151800 Weak transcription Stomach Mucosa stomach
40 chr1:197140800-197148600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:197140800-197151200 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr1:197141400-197166200 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:197141600-197146400 Strong transcription Skeletal Muscle Female skeletal muscle
44 chr1:197141600-197147000 Strong transcription Placenta Placenta
45 chr1:197141600-197150400 Strong transcription Dnd41 blood
46 chr1:197142000-197159600 Strong transcription Primary T cells fromperipheralblood blood
47 chr1:197142200-197146600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:197142200-197150400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:197142200-197150600 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr1:197142200-197150800 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015