Variant report
| Variant | rs62624968 |
|---|---|
| Chromosome Location | chr1:197073318-197073319 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:197052200-197074400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 2 | chr1:197052200-197076200 | Weak transcription | NHLF | lung |
| 3 | chr1:197052200-197083600 | Weak transcription | Fetal Stomach | stomach |
| 4 | chr1:197052200-197106600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 5 | chr1:197052200-197114200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr1:197054200-197113600 | Weak transcription | Fetal Kidney | kidney |
| 7 | chr1:197055000-197114200 | Weak transcription | Primary B cells from cord blood | blood |
| 8 | chr1:197055600-197074000 | Weak transcription | Placenta | Placenta |
| 9 | chr1:197060000-197073800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 10 | chr1:197066600-197083600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 11 | chr1:197067000-197092200 | Weak transcription | Fetal Intestine Large | intestine |
| 12 | chr1:197069600-197073600 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
| 13 | chr1:197070200-197076400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 14 | chr1:197070400-197074000 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
| 15 | chr1:197070600-197073400 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 16 | chr1:197070600-197076200 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
| 17 | chr1:197070600-197100000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr1:197070800-197075200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr1:197070800-197075400 | ZNF genes & repeats | K562 | blood |
| 20 | chr1:197070800-197078000 | Strong transcription | Fetal Thymus | thymus |
| 21 | chr1:197070800-197085400 | Weak transcription | Osteobl | bone |
| 22 | chr1:197071000-197074000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 23 | chr1:197071000-197074400 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr1:197071000-197084400 | Weak transcription | Fetal Heart | heart |
| 25 | chr1:197071000-197105400 | Strong transcription | Dnd41 | blood |
| 26 | chr1:197071200-197074200 | Active TSS | Brain Germinal Matrix | brain |
| 27 | chr1:197071200-197077400 | Strong transcription | Fetal Lung | lung |
| 28 | chr1:197071400-197095800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 29 | chr1:197071600-197074200 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 30 | chr1:197071600-197077800 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 31 | chr1:197071800-197073800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr1:197071800-197074000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 33 | chr1:197071800-197074200 | Active TSS | Fetal Brain Female | brain |
| 34 | chr1:197071800-197074400 | Strong transcription | HSMM | muscle |
| 35 | chr1:197071800-197104600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 36 | chr1:197072000-197073400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 37 | chr1:197072000-197074000 | Active TSS | Fetal Brain Male | brain |
| 38 | chr1:197072000-197074200 | Strong transcription | NHDF-Ad | bronchial |
| 39 | chr1:197072000-197076400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 40 | chr1:197072200-197074200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 41 | chr1:197072400-197073400 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
| 42 | chr1:197072400-197073400 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 43 | chr1:197072400-197073600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 44 | chr1:197072400-197073800 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 45 | chr1:197072400-197073800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 46 | chr1:197072400-197073800 | Strong transcription | GM12878-XiMat | blood |
| 47 | chr1:197072400-197074000 | Strong transcription | Thymus | Thymus |
| 48 | chr1:197072400-197074400 | Strong transcription | Primary hematopoietic stem cells | blood |
| 49 | chr1:197072400-197078000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 50 | chr1:197072600-197073600 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
