Variant report

Variant	rs10457419
Chromosome Location	chr6:121832262-121832263
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11154034	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12202477	0.89[AFR][1000 genomes]
rs1324096	0.93[ASN][1000 genomes]
rs1570629	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1886250	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1951906	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1977286	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2031299	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2093824	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6900780	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6920663	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6921648	0.83[ASN][1000 genomes]
rs6925183	0.93[ASN][1000 genomes]
rs6925191	0.93[ASN][1000 genomes]
rs6926300	0.94[ASN][1000 genomes]
rs6933477	0.91[ASN][1000 genomes]
rs6937659	0.91[CHB][hapmap];0.88[CHD][hapmap]
rs7454289	0.90[AFR][1000 genomes]
rs7757404	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7764196	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7773394	0.91[ASN][1000 genomes]
rs9375035	0.93[ASN][1000 genomes]
rs9385198	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9387962	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9387969	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9398637	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9398638	0.90[AFR][1000 genomes]
rs9401410	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121828600-121841200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr6:121829200-121836600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr6:121830000-121832400	Enhancers	HUVEC	blood vessel
4	chr6:121830600-121836600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:121830600-121843200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr6:121831400-121833000	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr6:121831600-121832400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr6:121831800-121832800	Enhancers	A549	lung
9	chr6:121832000-121836600	Weak transcription	NH-A	brain
10	chr6:121832000-121841400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr6:121832000-121842000	Weak transcription	HMEC	breast
12	chr6:121832200-121836400	Weak transcription	Osteobl	bone
13	chr6:121832200-121836800	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr6:121832200-121840600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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