Variant report

Variant	rs6926300
Chromosome Location	chr6:121824726-121824727
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1005801	0.88[AFR][1000 genomes]
rs10457419	0.94[ASN][1000 genomes]
rs11154034	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1324096	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1570629	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1815297	0.83[ASN][1000 genomes]
rs1886250	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1951906	0.83[ASN][1000 genomes]
rs1977286	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2031299	0.83[ASN][1000 genomes]
rs2093824	0.83[ASN][1000 genomes]
rs6900780	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6920663	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6921648	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6925183	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6925191	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6933477	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6937659	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs7757404	0.83[ASN][1000 genomes]
rs7764196	0.88[ASN][1000 genomes]
rs7773394	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9375035	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9385198	0.94[ASN][1000 genomes]
rs9387962	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9387969	0.83[ASN][1000 genomes]
rs9398637	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9401410	0.88[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121813200-121828000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:121817200-121825400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:121820000-121828000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:121824200-121829400	Enhancers	Hela-S3	cervix
5	chr6:121824400-121824800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:121824400-121825000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr6:121824400-121825000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:121824400-121825200	Enhancers	Aorta	Aorta
9	chr6:121824400-121825200	Flanking Active TSS	A549	lung
10	chr6:121824400-121825800	Enhancers	Fetal Lung	lung
11	chr6:121824400-121825800	Enhancers	NHLF	lung
12	chr6:121824400-121826000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:121824400-121826000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr6:121824400-121826000	Enhancers	NH-A	brain
15	chr6:121824400-121826000	Enhancers	Osteobl	bone
16	chr6:121824400-121826200	Enhancers	Muscle Satellite Cultured Cells	--
17	chr6:121824600-121825200	Enhancers	Fetal Stomach	stomach
18	chr6:121824600-121825800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr6:121824600-121826800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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