Variant report

Variant	rs10457745
Chromosome Location	chr6:143635188-143635189
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10457047	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10484580	0.90[EUR][1000 genomes]
rs12189733	0.92[EUR][1000 genomes]
rs12189942	0.92[EUR][1000 genomes]
rs12189943	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12190307	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12205812	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12207891	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17591455	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7742280	0.92[EUR][1000 genomes]
rs9321897	0.92[EUR][1000 genomes]
rs9484719	0.92[EUR][1000 genomes]
rs9484720	0.92[EUR][1000 genomes]
rs9496556	0.92[EUR][1000 genomes]
rs9496557	0.92[EUR][1000 genomes]
rs9496558	0.92[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143615400-143643400	Weak transcription	HSMM	muscle
2	chr6:143623200-143644600	Weak transcription	Liver	Liver
3	chr6:143630000-143637200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links