Variant report

Variant rs10461982
Chromosome Location chr5:37482791-37482792
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37463800-37489600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:37466000-37494400 Weak transcription Osteobl bone
3 chr5:37471600-37492400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr5:37472800-37483800 Weak transcription Fetal Heart heart
5 chr5:37476600-37513200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr5:37477000-37504400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr5:37477400-37483000 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr5:37478000-37483200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr5:37478200-37482800 Strong transcription Primary T cells fromperipheralblood blood
10 chr5:37478400-37502800 Weak transcription Psoas Muscle Psoas
11 chr5:37478600-37492800 Weak transcription Stomach Mucosa stomach
12 chr5:37478600-37494600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr5:37478600-37502600 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr5:37479200-37482800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr5:37479400-37482800 Strong transcription Fetal Muscle Trunk muscle
16 chr5:37479600-37483200 Strong transcription Liver Liver
17 chr5:37479600-37486000 Weak transcription HUVEC blood vessel
18 chr5:37479800-37482800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
19 chr5:37479800-37482800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
20 chr5:37479800-37482800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr5:37479800-37482800 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr5:37479800-37482800 Strong transcription Brain Anterior Caudate brain
23 chr5:37479800-37482800 Strong transcription Duodenum Mucosa Duodenum
24 chr5:37479800-37483000 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr5:37479800-37483000 Strong transcription Duodenum Smooth Muscle Duodenum
26 chr5:37479800-37483600 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr5:37480000-37482800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr5:37480000-37482800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr5:37480000-37483000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
30 chr5:37480000-37483000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr5:37480000-37483000 Strong transcription Adipose Nuclei Adipose
32 chr5:37480000-37483000 ZNF genes & repeats Fetal Brain Female brain
33 chr5:37480000-37483200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr5:37480000-37483200 Strong transcription Rectal Smooth Muscle rectum
35 chr5:37480200-37482800 Strong transcription Ovary ovary
36 chr5:37480200-37482800 ZNF genes & repeats Thymus Thymus
37 chr5:37480200-37483000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
38 chr5:37480200-37483000 Strong transcription Primary T helper naive cells from peripheral blood blood
39 chr5:37480200-37483200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr5:37480200-37483200 Strong transcription Left Ventricle heart
41 chr5:37480400-37488000 Weak transcription K562 blood
42 chr5:37480400-37488800 Weak transcription Hela-S3 cervix
43 chr5:37480600-37483000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr5:37480600-37493200 Weak transcription HSMMtube muscle
45 chr5:37480600-37493400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr5:37480600-37495600 Weak transcription HSMM muscle
47 chr5:37480600-37510800 Weak transcription Brain Angular Gyrus brain
48 chr5:37480800-37486200 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr5:37480800-37492400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr5:37480800-37493200 Weak transcription Skeletal Muscle Female skeletal muscle

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