Variant report

Variant	rs10467218
Chromosome Location	chr13:97652595-97652596
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1501860	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1501862	0.83[AMR][1000 genomes]
rs61528018	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7323624	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7323749	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7324215	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7328024	0.85[AMR][1000 genomes]
rs7329047	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73550844	0.85[AMR][1000 genomes]
rs74107003	0.83[AMR][1000 genomes]
rs74107008	0.83[AMR][1000 genomes]
rs74107009	0.83[AMR][1000 genomes]
rs74107011	0.83[AMR][1000 genomes]
rs7983514	0.85[AMR][1000 genomes]
rs7986614	0.85[AMR][1000 genomes]
rs7987624	0.85[AMR][1000 genomes]
rs9300383	0.85[AMR][1000 genomes]
rs9584466	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832693	chr13:97594845-97777481	Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97647200-97653400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr13:97647600-97653400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr13:97649600-97653400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr13:97650400-97657400	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr13:97652200-97652600	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr13:97652400-97653200	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
7	chr13:97652400-97653200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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