The 2.0 version of rSNPBase

Variant report

Variant rs10478073
Chromosome Location chr5:111571496-111571497
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111504800-111586400 Weak transcription Gastric stomach
2 chr5:111558600-111584400 Weak transcription Psoas Muscle Psoas
3 chr5:111558800-111591400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:111562200-111574400 Weak transcription H1 Cell Line embryonic stem cell
5 chr5:111562800-111572000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr5:111562800-111573000 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr5:111564200-111581400 Weak transcription Aorta Aorta
8 chr5:111564600-111571600 Enhancers Hela-S3 cervix
9 chr5:111564600-111575800 Weak transcription Esophagus oesophagus
10 chr5:111564600-111576600 Weak transcription Ovary ovary
11 chr5:111564600-111580200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr5:111564600-111586400 Weak transcription Lung lung
13 chr5:111564600-111590000 Weak transcription Left Ventricle heart
14 chr5:111564600-111609600 Weak transcription Pancreas Pancrea
15 chr5:111564800-111571600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr5:111564800-111576000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr5:111564800-111577200 Weak transcription Liver Liver
18 chr5:111564800-111582800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr5:111564800-111589400 Weak transcription HUVEC blood vessel
20 chr5:111565000-111573800 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr5:111567400-111602400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:111568600-111609600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr5:111569200-111576800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr5:111569600-111581400 Weak transcription Placenta Amnion Placenta Amnion
25 chr5:111569600-111589000 Weak transcription Adipose Nuclei Adipose
26 chr5:111570200-111572200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr5:111570600-111572200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:111570600-111572800 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr5:111570600-111573400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr5:111570800-111573200 Enhancers Fetal Heart heart
31 chr5:111571000-111572400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr5:111571000-111572600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:111571000-111572800 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr5:111571000-111573200 Weak transcription A549 lung
35 chr5:111571200-111581400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015