The 2.0 version of rSNPBase

Variant report

Variant rs6884589
Chromosome Location chr5:111536752-111536753
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111497600-111538600 Weak transcription Small Intestine intestine
2 chr5:111501400-111546400 Weak transcription Spleen Spleen
3 chr5:111502400-111546400 Weak transcription Aorta Aorta
4 chr5:111502800-111546000 Weak transcription Ovary ovary
5 chr5:111503600-111537400 Weak transcription Lung lung
6 chr5:111504800-111541400 Weak transcription Right Ventricle heart
7 chr5:111504800-111557800 Weak transcription Placenta Amnion Placenta Amnion
8 chr5:111504800-111586400 Weak transcription Gastric stomach
9 chr5:111505000-111537400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr5:111505600-111541800 Weak transcription Fetal Muscle Leg muscle
11 chr5:111510800-111540000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr5:111510800-111547400 Weak transcription HUVEC blood vessel
13 chr5:111519000-111546400 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr5:111519200-111537400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr5:111519200-111553800 Weak transcription Pancreas Pancrea
16 chr5:111519800-111553600 Weak transcription Esophagus oesophagus
17 chr5:111523400-111540600 Weak transcription Hela-S3 cervix
18 chr5:111523800-111537400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr5:111526400-111537400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr5:111529800-111553600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr5:111533600-111537800 Weak transcription Fetal Kidney kidney
22 chr5:111534800-111537800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:111535000-111538200 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr5:111535000-111541800 Weak transcription Fetal Brain Female brain
25 chr5:111535200-111538800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr5:111535600-111539400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:111535600-111540200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr5:111535800-111537400 Weak transcription Left Ventricle heart
29 chr5:111536000-111537600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr5:111536000-111538800 Weak transcription Fetal Muscle Trunk muscle
31 chr5:111536200-111538600 Weak transcription Stomach Smooth Muscle stomach
32 chr5:111536400-111537200 Enhancers Fetal Heart heart
33 chr5:111536400-111538800 Strong transcription Adipose Nuclei Adipose
34 chr5:111536400-111539000 Weak transcription Fetal Lung lung
35 chr5:111536400-111541600 Weak transcription Fetal Stomach stomach
36 chr5:111536600-111540600 Strong transcription Placenta Placenta

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015