The 2.0 version of rSNPBase

Variant report

Variant rs6594567
Chromosome Location chr5:111503142-111503143
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111497600-111538600 Weak transcription Small Intestine intestine
2 chr5:111497800-111504400 Weak transcription Placenta Amnion Placenta Amnion
3 chr5:111497800-111505000 Strong transcription Primary T cells fromperipheralblood blood
4 chr5:111497800-111505000 Strong transcription Fetal Muscle Trunk muscle
5 chr5:111498000-111503600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr5:111498000-111504800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr5:111498000-111504800 Strong transcription Fetal Thymus thymus
8 chr5:111498000-111505600 Strong transcription Fetal Muscle Leg muscle
9 chr5:111498000-111505600 Strong transcription Placenta Placenta
10 chr5:111498200-111504800 Strong transcription Fetal Intestine Large intestine
11 chr5:111498200-111504800 Strong transcription Sigmoid Colon Sigmoid Colon
12 chr5:111498200-111505000 Strong transcription Rectal Mucosa Donor 29 rectum
13 chr5:111498200-111505600 Strong transcription Stomach Smooth Muscle stomach
14 chr5:111498200-111518800 Weak transcription Right Atrium heart
15 chr5:111498400-111503600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr5:111498400-111504800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr5:111498400-111504800 Strong transcription Skeletal Muscle Male skeletal muscle
18 chr5:111498400-111506000 Strong transcription Left Ventricle heart
19 chr5:111498400-111506400 Strong transcription Fetal Kidney kidney
20 chr5:111498400-111506800 Strong transcription Adipose Nuclei Adipose
21 chr5:111498600-111503600 Strong transcription Primary T helper naive cells fromperipheralblood blood
22 chr5:111498600-111503800 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr5:111498600-111503800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr5:111498600-111504800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:111498600-111504800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr5:111498600-111504800 Strong transcription Thymus Thymus
27 chr5:111498600-111505000 Strong transcription Primary B cells from cord blood blood
28 chr5:111498600-111506600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr5:111498800-111503800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr5:111498800-111504000 Strong transcription Primary B cells from peripheral blood blood
31 chr5:111498800-111504000 Strong transcription Fetal Stomach stomach
32 chr5:111498800-111504400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
33 chr5:111498800-111504600 Strong transcription Primary T cells from cord blood blood
34 chr5:111498800-111504800 Strong transcription Brain Hippocampus Middle brain
35 chr5:111498800-111505000 Strong transcription Duodenum Mucosa Duodenum
36 chr5:111498800-111506800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr5:111498800-111507600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr5:111499000-111503600 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr5:111499000-111503600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr5:111499000-111505000 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr5:111499000-111505000 Strong transcription Fetal Lung lung
42 chr5:111499200-111504400 Strong transcription Duodenum Smooth Muscle Duodenum
43 chr5:111499200-111504600 Strong transcription Brain Cingulate Gyrus brain
44 chr5:111499200-111504800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr5:111499200-111505800 Strong transcription Fetal Brain Female brain
46 chr5:111499400-111503600 Strong transcription Dnd41 blood
47 chr5:111499600-111504200 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr5:111499600-111504800 Strong transcription Primary T helper cells PMA-I stimulated --
49 chr5:111499600-111505000 Strong transcription Esophagus oesophagus
50 chr5:111499600-111507200 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015