The 2.0 version of rSNPBase

Variant report

Variant rs62372421
Chromosome Location chr5:111505420-111505421
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111497600-111538600 Weak transcription Small Intestine intestine
2 chr5:111498000-111505600 Strong transcription Fetal Muscle Leg muscle
3 chr5:111498000-111505600 Strong transcription Placenta Placenta
4 chr5:111498200-111505600 Strong transcription Stomach Smooth Muscle stomach
5 chr5:111498200-111518800 Weak transcription Right Atrium heart
6 chr5:111498400-111506000 Strong transcription Left Ventricle heart
7 chr5:111498400-111506400 Strong transcription Fetal Kidney kidney
8 chr5:111498400-111506800 Strong transcription Adipose Nuclei Adipose
9 chr5:111498600-111506600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:111498800-111506800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr5:111498800-111507600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:111499200-111505800 Strong transcription Fetal Brain Female brain
13 chr5:111499600-111507200 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr5:111499600-111510800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr5:111499800-111510600 Weak transcription Colon Smooth Muscle Colon
16 chr5:111500000-111510600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr5:111500200-111510600 Weak transcription Brain Anterior Caudate brain
18 chr5:111500400-111510600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr5:111500600-111508800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr5:111500800-111510600 Weak transcription NHEK skin
21 chr5:111501400-111546400 Weak transcription Spleen Spleen
22 chr5:111502200-111506000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr5:111502200-111510600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr5:111502200-111510600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr5:111502200-111510600 Weak transcription Primary hematopoietic stem cells blood
26 chr5:111502200-111511000 Weak transcription Brain Substantia Nigra brain
27 chr5:111502400-111506000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr5:111502400-111510600 Weak transcription Fetal Heart heart
29 chr5:111502400-111510600 Weak transcription K562 blood
30 chr5:111502400-111510600 Weak transcription NH-A brain
31 chr5:111502400-111518800 Weak transcription Pancreas Pancrea
32 chr5:111502400-111546400 Weak transcription Aorta Aorta
33 chr5:111502600-111506200 Weak transcription NHLF lung
34 chr5:111502600-111506600 Weak transcription Primary monocytes fromperipheralblood blood
35 chr5:111502600-111507000 Weak transcription HMEC breast
36 chr5:111502600-111509600 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr5:111502600-111510600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr5:111502600-111510600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr5:111502600-111510600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr5:111502600-111510600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr5:111502600-111510600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr5:111502600-111510600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr5:111502800-111507200 Weak transcription Brain Germinal Matrix brain
44 chr5:111502800-111509800 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr5:111502800-111510600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr5:111502800-111546000 Weak transcription Ovary ovary
47 chr5:111503000-111510400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr5:111503000-111510600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr5:111503400-111508600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr5:111503600-111506000 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015