Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10230157	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10240086	1.00[EUR][1000 genomes]
rs10245834	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10248886	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10251993	1.00[EUR][1000 genomes]
rs10252434	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10268112	1.00[EUR][1000 genomes]
rs10273883	1.00[EUR][1000 genomes]
rs28446682	1.00[EUR][1000 genomes]
rs28532043	1.00[EUR][1000 genomes]
rs2965097	1.00[EUR][1000 genomes]
rs59179196	1.00[EUR][1000 genomes]
rs59182081	1.00[EUR][1000 genomes]
rs59586827	1.00[EUR][1000 genomes]
rs59773217	1.00[EUR][1000 genomes]
rs60006777	1.00[EUR][1000 genomes]
rs61613960	1.00[EUR][1000 genomes]
rs62622397	1.00[EUR][1000 genomes]
rs6465911	1.00[EUR][1000 genomes]
rs6465927	1.00[EUR][1000 genomes]
rs732768	1.00[EUR][1000 genomes]
rs73412168	1.00[EUR][1000 genomes]
rs73412171	1.00[EUR][1000 genomes]
rs73412175	1.00[EUR][1000 genomes]
rs73414107	1.00[EUR][1000 genomes]
rs73418516	1.00[EUR][1000 genomes]
rs73712383	1.00[EUR][1000 genomes]
rs73712388	1.00[EUR][1000 genomes]
rs73712399	1.00[EUR][1000 genomes]
rs73714429	1.00[EUR][1000 genomes]
rs7792779	1.00[EUR][1000 genomes]
rs7811224	1.00[EUR][1000 genomes]
rs7811571	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030446	chr7:102932689-103221638	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	esv2117969	chr7:103092731-103096641	Bivalent/Poised TSS ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103094400-103097800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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