Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10230157	1.00[EUR][1000 genomes]
rs10245834	1.00[EUR][1000 genomes]
rs10248886	1.00[EUR][1000 genomes]
rs10251993	1.00[EUR][1000 genomes]
rs10252434	1.00[EUR][1000 genomes]
rs10273883	1.00[EUR][1000 genomes]
rs10480646	1.00[EUR][1000 genomes]
rs28446682	1.00[EUR][1000 genomes]
rs28532043	1.00[EUR][1000 genomes]
rs2965097	1.00[EUR][1000 genomes]
rs59179196	1.00[EUR][1000 genomes]
rs59182081	1.00[EUR][1000 genomes]
rs59586827	1.00[EUR][1000 genomes]
rs59773217	1.00[EUR][1000 genomes]
rs60006777	1.00[EUR][1000 genomes]
rs61613960	1.00[EUR][1000 genomes]
rs62622397	1.00[EUR][1000 genomes]
rs6465911	1.00[EUR][1000 genomes]
rs6465927	1.00[EUR][1000 genomes]
rs732768	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73412168	1.00[EUR][1000 genomes]
rs73412171	1.00[EUR][1000 genomes]
rs73412175	1.00[EUR][1000 genomes]
rs73414107	1.00[EUR][1000 genomes]
rs73418516	1.00[EUR][1000 genomes]
rs73712383	1.00[EUR][1000 genomes]
rs73712388	1.00[EUR][1000 genomes]
rs73714429	1.00[EUR][1000 genomes]
rs7792779	1.00[EUR][1000 genomes]
rs7811224	1.00[EUR][1000 genomes]
rs7811571	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030446	chr7:102932689-103221638	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103118400-103138000	Weak transcription	Brain Cingulate Gyrus	brain
2	chr7:103121200-103122400	Strong transcription	K562	blood
3	chr7:103121400-103127000	Strong transcription	HepG2	liver
4	chr7:103121600-103123200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr7:103121800-103130800	Weak transcription	Brain Hippocampus Middle	brain
6	chr7:103122200-103122800	Strong transcription	Brain Substantia Nigra	brain
7	chr7:103122200-103123800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr7:103122200-103124200	Strong transcription	Brain Anterior Caudate	brain

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