Variant report

Variant	rs10273883
Chromosome Location	chr7:103018016-103018017
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:103014686..103018560-chr7:103018834..103021905,4	K562	blood:
2	chr7:103017075..103019206-chr7:103029655..103032336,2	MCF-7	breast:
3	chr7:103014337..103016156-chr7:103016846..103018427,2	K562	blood:
4	chr7:103015661..103018560-chr7:103018928..103023107,3	K562	blood:
5	chr7:103014337..103016382-chr7:103016846..103018523,2	K562	blood:

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10230157	1.00[EUR][1000 genomes]
rs10240086	1.00[EUR][1000 genomes]
rs10245834	1.00[EUR][1000 genomes]
rs10248886	1.00[EUR][1000 genomes]
rs10251993	1.00[EUR][1000 genomes]
rs10252434	1.00[EUR][1000 genomes]
rs10268112	1.00[EUR][1000 genomes]
rs10480646	1.00[EUR][1000 genomes]
rs11760826	1.00[EUR][1000 genomes]
rs12155099	1.00[EUR][1000 genomes]
rs12539639	1.00[EUR][1000 genomes]
rs13362860	1.00[CHB][hapmap]
rs1861725	1.00[EUR][1000 genomes]
rs1861726	1.00[EUR][1000 genomes]
rs1861732	1.00[EUR][1000 genomes]
rs1968202	1.00[EUR][1000 genomes]
rs2111381	1.00[EUR][1000 genomes]
rs28446682	1.00[EUR][1000 genomes]
rs28532043	1.00[EUR][1000 genomes]
rs2965097	1.00[EUR][1000 genomes]
rs4729892	1.00[EUR][1000 genomes]
rs59179196	1.00[EUR][1000 genomes]
rs59182081	1.00[EUR][1000 genomes]
rs59586827	1.00[EUR][1000 genomes]
rs59773217	1.00[EUR][1000 genomes]
rs60006777	1.00[EUR][1000 genomes]
rs61613960	1.00[EUR][1000 genomes]
rs62622397	1.00[EUR][1000 genomes]
rs6465905	1.00[EUR][1000 genomes]
rs6465907	1.00[EUR][1000 genomes]
rs6465911	1.00[EUR][1000 genomes]
rs6465927	1.00[EUR][1000 genomes]
rs732768	1.00[EUR][1000 genomes]
rs73412168	1.00[EUR][1000 genomes]
rs73412171	1.00[EUR][1000 genomes]
rs73412175	1.00[EUR][1000 genomes]
rs73414107	1.00[EUR][1000 genomes]
rs73418516	1.00[EUR][1000 genomes]
rs73712383	1.00[EUR][1000 genomes]
rs73712388	1.00[EUR][1000 genomes]
rs73712399	1.00[EUR][1000 genomes]
rs73714429	1.00[EUR][1000 genomes]
rs7782147	1.00[EUR][1000 genomes]
rs7792779	1.00[EUR][1000 genomes]
rs7811224	1.00[EUR][1000 genomes]
rs7811571	1.00[EUR][1000 genomes]
rs9640672	1.00[EUR][1000 genomes]
rs9641307	1.00[EUR][1000 genomes]
rs9641308	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030446	chr7:102932689-103221638	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:102989800-103021200	Weak transcription	Fetal Heart	heart
2	chr7:103009000-103019400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr7:103009000-103021000	Weak transcription	Gastric	stomach
4	chr7:103009000-103021000	Weak transcription	Pancreas	Pancrea
5	chr7:103009000-103021200	Weak transcription	Fetal Lung	lung
6	chr7:103009000-103029200	Weak transcription	Spleen	Spleen
7	chr7:103009200-103020800	Weak transcription	HepG2	liver
8	chr7:103010000-103019000	Weak transcription	K562	blood
9	chr7:103010800-103021000	Weak transcription	Duodenum Mucosa	Duodenum
10	chr7:103011200-103019600	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr7:103018000-103018200	Active TSS	Brain Substantia Nigra	brain

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