The 2.0 version of rSNPBase

Variant report

Variant rs1056593
Chromosome Location chr11:9772840-9772841
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9742200-9779400 Weak transcription Fetal Brain Male brain
2 chr11:9745000-9775600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr11:9755000-9777600 Weak transcription Colonic Mucosa Colon
4 chr11:9757600-9774600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr11:9758800-9776000 Weak transcription Brain Germinal Matrix brain
6 chr11:9761000-9777200 Weak transcription Fetal Kidney kidney
7 chr11:9762400-9777200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr11:9762400-9777400 Weak transcription Esophagus oesophagus
9 chr11:9762400-9777400 Weak transcription Right Ventricle heart
10 chr11:9762400-9779400 Weak transcription Liver Liver
11 chr11:9762400-9779400 Weak transcription Psoas Muscle Psoas
12 chr11:9762600-9779200 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr11:9762800-9779400 Weak transcription Fetal Brain Female brain
14 chr11:9763200-9773600 Weak transcription HepG2 liver
15 chr11:9763200-9775200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr11:9763600-9779400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr11:9764400-9773800 Weak transcription Thymus Thymus
18 chr11:9764800-9774000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr11:9766200-9774000 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr11:9766400-9774000 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr11:9766800-9774000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr11:9768800-9774200 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr11:9770200-9773400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr11:9770200-9773600 Strong transcription Muscle Satellite Cultured Cells --
25 chr11:9770200-9773600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr11:9770200-9774000 Strong transcription iPS-20b Cell Line embryonic stem cell
27 chr11:9770200-9774000 Strong transcription Cortex derived primary cultured neurospheres brain
28 chr11:9770200-9774000 Strong transcription Fetal Muscle Trunk muscle
29 chr11:9770200-9774200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr11:9770200-9774200 Strong transcription HUES6 Cell Line embryonic stem cell
31 chr11:9770200-9774200 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr11:9770200-9774200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr11:9770200-9775400 Weak transcription Right Atrium heart
34 chr11:9770200-9775800 Weak transcription Brain Angular Gyrus brain
35 chr11:9770200-9776400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr11:9770200-9777000 Weak transcription Placenta Amnion Placenta Amnion
37 chr11:9770200-9777000 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr11:9770200-9777600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr11:9770200-9777600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr11:9770200-9779200 Weak transcription Colon Smooth Muscle Colon
41 chr11:9770200-9779400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr11:9770200-9779400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr11:9770200-9779400 Weak transcription Ovary ovary
44 chr11:9770200-9779400 Weak transcription Pancreas Pancrea
45 chr11:9770200-9779600 Weak transcription Small Intestine intestine
46 chr11:9770400-9773000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr11:9770400-9773600 Weak transcription K562 blood
48 chr11:9770400-9773800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr11:9770400-9773800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr11:9770400-9774000 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015