Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:4152763..4155305-chr10:4156229..4159023,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10795135	1.00[AMR][1000 genomes]
rs10795137	1.00[AMR][1000 genomes]
rs1923393	1.00[AMR][1000 genomes]
rs1923404	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2397406	0.89[AFR][1000 genomes]
rs2397407	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2397409	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2894885	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4881288	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4881289	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4881292	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4881294	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4881295	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4881296	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6601816	1.00[AMR][1000 genomes]
rs7071392	1.00[AMR][1000 genomes]
rs7076404	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7077190	1.00[AMR][1000 genomes]
rs7092257	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7096271	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs7100392	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7902310	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7908789	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051297	chr10:3908706-4277678	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
2	nsv831772	chr10:4039292-4212218	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4152400-4154400	Weak transcription	NHLF	lung
2	chr10:4153200-4154600	Enhancers	Osteobl	bone
3	chr10:4153400-4154400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr10:4153400-4154600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr10:4153400-4154800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr10:4153400-4154800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr10:4153400-4154800	Weak transcription	Left Ventricle	heart
8	chr10:4154000-4154400	Enhancers	NH-A	brain
9	chr10:4154000-4154600	Enhancers	Muscle Satellite Cultured Cells	--
10	chr10:4154000-4154600	Enhancers	NHDF-Ad	bronchial

Quick Search: