Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10750750	0.95[CHB][hapmap];0.82[JPT][hapmap]
rs10750754	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10791801	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10791802	0.95[CHB][hapmap];0.96[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10895938	0.81[ASN][1000 genomes]
rs11226987	0.82[ASN][1000 genomes]
rs1396156	0.86[CHB][hapmap];0.96[JPT][hapmap];0.80[ASN][1000 genomes]
rs1396159	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1396160	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1605567	0.86[CHB][hapmap];0.95[JPT][hapmap]
rs1806481	0.86[CHB][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes]
rs4755146	0.95[CHB][hapmap];0.83[JPT][hapmap]
rs520345	0.80[EUR][1000 genomes]
rs562295	0.81[EUR][1000 genomes]
rs571160	0.81[EUR][1000 genomes]
rs584889	0.86[EUR][1000 genomes]
rs608056	0.81[EUR][1000 genomes]
rs618453	0.81[EUR][1000 genomes]
rs636907	0.81[EUR][1000 genomes]
rs651388	0.81[EUR][1000 genomes]
rs652726	0.81[EUR][1000 genomes]
rs652812	0.81[EUR][1000 genomes]
rs653183	0.81[EUR][1000 genomes]
rs674799	0.82[CHB][hapmap]
rs7126969	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048381	chr11:105945117-106561574	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	esv2754854	chr11:106092790-106245790	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1054471	chr11:106168484-106427713	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1041862	chr11:106210820-106238696	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2760288	chr11:106214708-106238708	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106216400-106216800	Enhancers	Fetal Brain Male	brain

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