Variant report
Variant | rs584889 |
---|---|
Chromosome Location | chr11:106186074-106186075 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10750753 | 0.86[EUR][1000 genomes] |
rs10750754 | 0.86[EUR][1000 genomes] |
rs10791801 | 0.91[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs10791802 | 1.00[CEU][hapmap];0.99[EUR][1000 genomes] |
rs11226987 | 0.83[EUR][1000 genomes] |
rs1268739 | 0.91[ASN][1000 genomes] |
rs1396156 | 0.89[CEU][hapmap] |
rs1396159 | 0.86[EUR][1000 genomes] |
rs1396160 | 0.87[EUR][1000 genomes] |
rs1605567 | 0.88[CEU][hapmap] |
rs1806481 | 0.89[CEU][hapmap] |
rs1955018 | 0.92[ASN][1000 genomes] |
rs3018017 | 0.86[ASN][1000 genomes] |
rs542358 | 0.82[ASN][1000 genomes] |
rs594050 | 0.89[ASN][1000 genomes] |
rs613928 | 0.91[ASN][1000 genomes] |
rs617143 | 0.81[ASN][1000 genomes] |
rs660647 | 0.82[ASN][1000 genomes] |
rs667501 | 0.81[ASN][1000 genomes] |
rs674799 | 0.92[ASN][1000 genomes] |
rs675319 | 0.90[ASN][1000 genomes] |
rs687908 | 0.82[ASN][1000 genomes] |
rs7126969 | 0.90[EUR][1000 genomes];0.81[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1048381 | chr11:105945117-106561574 | Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 13 gene(s) | inside rSNPs | diseases |
2 | esv2754854 | chr11:106092790-106245790 | Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
3 | nsv1054471 | chr11:106168484-106427713 | Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:106183200-106187000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
2 | chr11:106183200-106189200 | Weak transcription | NHDF-Ad | bronchial |