Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:106197475..106199987-chr11:106225998..106227793,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10750750	1.00[CEU][hapmap];0.82[CHB][hapmap];0.95[EUR][1000 genomes]
rs10791802	0.82[CHB][hapmap]
rs1268739	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1605565	0.84[EUR][1000 genomes]
rs1955018	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2409624	0.96[EUR][1000 genomes]
rs3018017	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3018019	0.86[EUR][1000 genomes]
rs4755146	1.00[CEU][hapmap];0.81[CHB][hapmap];0.95[EUR][1000 genomes]
rs488212	0.83[ASN][1000 genomes]
rs542358	0.84[ASN][1000 genomes]
rs584889	0.82[ASN][1000 genomes]
rs594050	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs602407	0.85[CEU][hapmap];0.85[CHB][hapmap];0.95[JPT][hapmap]
rs613928	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs617143	0.84[ASN][1000 genomes]
rs660647	0.84[ASN][1000 genomes]
rs667501	0.84[ASN][1000 genomes]
rs674799	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs675319	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048381	chr11:105945117-106561574	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	esv2754854	chr11:106092790-106245790	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1054471	chr11:106168484-106427713	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106196400-106198600	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr11:106196600-106198400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr11:106196600-106198400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:106196600-106198400	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr11:106197000-106198600	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr11:106197200-106198000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr11:106197200-106198000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:106197200-106198000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr11:106197200-106198000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr11:106197200-106198200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
11	chr11:106197200-106198200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr11:106197200-106198600	Enhancers	H1 Cell Line	embryonic stem cell
13	chr11:106197200-106198600	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr11:106197200-106199000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr11:106197400-106198400	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr11:106197600-106198000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr11:106197800-106198000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
18	chr11:106197800-106199200	Enhancers	Fetal Brain Male	brain

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