The 2.0 version of rSNPBase

Variant report

Variant rs1075544
Chromosome Location chr3:177696112-177696113
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:177694200-177697000 Enhancers Osteobl bone
2 chr3:177694200-177697600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
3 chr3:177694400-177696400 Enhancers Fetal Lung lung
4 chr3:177694600-177698000 Enhancers HSMM muscle
5 chr3:177695200-177696400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr3:177695200-177696400 Enhancers HUVEC blood vessel
7 chr3:177695400-177696200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr3:177695400-177696400 Flanking Active TSS Muscle Satellite Cultured Cells --
9 chr3:177695600-177696400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr3:177695600-177700600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:177695800-177696800 Weak transcription Fetal Intestine Large intestine
12 chr3:177695800-177696800 Enhancers NH-A brain
13 chr3:177695800-177698000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr3:177695800-177699400 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr3:177695800-177699600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:177696000-177696400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr3:177696000-177696400 Weak transcription NHLF lung
18 chr3:177696000-177698000 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015