Variant report
Variant | rs10765619 |
---|---|
Chromosome Location | chr11:93382017-93382018 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:3 , 50 per page) page:
1
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10741469 | 0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10765623 | 0.86[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1080367 | 0.88[CEU][hapmap];0.89[CHB][hapmap];0.83[JPT][hapmap];0.90[EUR][1000 genomes] |
rs10831082 | 0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10831083 | 0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10831084 | 0.92[CEU][hapmap];0.82[CHB][hapmap];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs11020478 | 0.83[JPT][hapmap] |
rs11020479 | 0.89[CEU][hapmap];0.84[CHB][hapmap];0.83[JPT][hapmap];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11529070 | 0.90[EUR][1000 genomes] |
rs1939568 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs1944108 | 0.88[CEU][hapmap];0.89[CHB][hapmap];0.83[JPT][hapmap];0.88[EUR][1000 genomes] |
rs2186685 | 0.89[CEU][hapmap];0.89[CHB][hapmap];0.83[JPT][hapmap];0.88[EUR][1000 genomes] |
rs4363551 | 0.90[EUR][1000 genomes] |
rs4376865 | 0.81[EUR][1000 genomes] |
rs4619111 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4753485 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs603360 | 0.90[CHB][hapmap];0.83[JPT][hapmap] |
rs694699 | 0.89[EUR][1000 genomes] |
rs7111796 | 0.89[EUR][1000 genomes] |
rs7925086 | 0.88[CEU][hapmap];0.90[CHB][hapmap];0.83[JPT][hapmap];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs9888134 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv898181 | chr11:93072843-93662459 | Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 119 gene(s) | inside rSNPs | diseases |
2 | nsv975401 | chr11:93364502-93390549 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
3 | nsv898182 | chr11:93381845-93637462 | Strong transcription Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 108 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:93379000-93387800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
2 | chr11:93379000-93388800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |