Variant report

Variant	rs10766256
Chromosome Location	chr11:15505342-15505343
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EBF1	chr11:15504746-15505409	GM12878	blood:	n/a	chr11:15504953-15504964 chr11:15504955-15504965 chr11:15504955-15504964

Variant related genes	Relation type
ENSG00000253072	TF binding region

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10500816	0.89[EUR][1000 genomes]
rs10766259	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10832445	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10832447	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10832450	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10832453	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10832454	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10832455	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10832456	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10832475	0.83[EUR][1000 genomes]
rs10832476	0.83[EUR][1000 genomes]
rs11023591	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023592	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023594	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023602	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11023603	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023610	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023611	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023613	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023614	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023615	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023617	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023618	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023631	0.86[EUR][1000 genomes]
rs11023632	0.86[EUR][1000 genomes]
rs11023633	0.86[EUR][1000 genomes]
rs11023634	0.86[EUR][1000 genomes]
rs11023637	0.83[EUR][1000 genomes]
rs12290607	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12363765	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12365899	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12366179	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2351047	0.83[EUR][1000 genomes]
rs2351097	0.89[EUR][1000 genomes]
rs4129902	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4338491	0.89[EUR][1000 genomes]
rs55693485	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs55890157	0.89[EUR][1000 genomes]
rs7120322	0.89[EUR][1000 genomes]
rs72866609	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72868214	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72868268	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72869600	0.84[EUR][1000 genomes]
rs7481938	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7926379	0.89[EUR][1000 genomes]
rs7938802	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7944494	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1809270	chr11:15504338-15528140	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15500200-15506000	Weak transcription	Fetal Intestine Large	intestine
2	chr11:15504000-15506000	Weak transcription	Fetal Intestine Small	intestine
3	chr11:15504000-15506400	Enhancers	GM12878-XiMat	blood
4	chr11:15505200-15507400	Weak transcription	Liver	Liver

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