Variant report

Variant	rs12366179
Chromosome Location	chr11:15545464-15545465
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10500816	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10766256	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10766259	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10832445	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10832447	0.97[ASN][1000 genomes]
rs10832450	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10832453	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10832454	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10832455	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10832456	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10832475	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10832476	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11023591	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023592	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023594	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023602	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023603	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023613	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023614	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023615	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023618	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023631	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11023632	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11023633	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11023634	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11023635	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11023637	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11602523	0.80[AMR][1000 genomes]
rs12290607	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12360670	0.83[EUR][1000 genomes]
rs12363765	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12365899	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2351045	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2351047	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2351097	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2882570	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4129902	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4338491	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs55693485	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55890157	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7120322	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72866609	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72868214	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72868268	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72869600	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7481938	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7926379	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7938802	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7944494	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15544400-15547200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr11:15544600-15545800	Enhancers	Fetal Intestine Small	intestine
3	chr11:15545000-15547400	Enhancers	Liver	Liver

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