Variant report

Variant	rs4338491
Chromosome Location	chr11:15559144-15559145
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:15556906..15558780-chr11:15558823..15561299,2	K562	blood:
2	chr11:15554869..15557314-chr11:15558489..15561058,2	MCF-7	breast:

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10500816	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10766256	1.00[CEU][hapmap];1.00[GIH][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes]
rs10766259	0.89[EUR][1000 genomes]
rs10832445	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10832450	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10832453	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10832454	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10832455	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10832456	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10832475	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10832476	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10832479	0.95[ASN][1000 genomes]
rs11023591	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11023592	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11023594	0.89[EUR][1000 genomes]
rs11023602	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11023603	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11023610	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11023611	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11023613	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11023614	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11023615	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11023617	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11023618	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11023631	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023632	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023633	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023634	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023635	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11023637	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11023638	0.95[ASN][1000 genomes]
rs11602523	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12290607	0.90[EUR][1000 genomes]
rs12360670	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12363765	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12365899	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12366179	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16931632	0.91[ASN][1000 genomes]
rs17438762	0.95[ASN][1000 genomes]
rs2351045	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2351047	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2351097	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2882570	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4129902	0.89[EUR][1000 genomes]
rs55693485	0.87[EUR][1000 genomes]
rs55890157	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57259840	0.81[ASN][1000 genomes]
rs59596795	0.91[ASN][1000 genomes]
rs59739905	0.95[ASN][1000 genomes]
rs7120322	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72866609	0.89[EUR][1000 genomes]
rs72868214	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72868268	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72869600	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7481938	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7926379	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7938802	0.89[EUR][1000 genomes]
rs7944494	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15558400-15569400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links