Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10509547	1.00[CHB][hapmap]
rs10509548	1.00[CHB][hapmap]
rs10509549	1.00[CHB][hapmap]
rs10509550	1.00[CHB][hapmap]
rs11816967	1.00[CHB][hapmap]
rs1426621	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1573074	1.00[CHB][hapmap]
rs17334741	1.00[CHB][hapmap]
rs17336288	1.00[CHB][hapmap]
rs17426488	1.00[CHB][hapmap]
rs1774977	1.00[CHB][hapmap]
rs2488273	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2765451	1.00[CHB][hapmap]
rs2872069	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6586126	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs701892	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs7100373	1.00[ASN][1000 genomes]
rs7906629	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7914501	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[ASN][1000 genomes]
rs792201	1.00[CHB][hapmap]
rs792219	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs792222	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs792231	1.00[CHB][hapmap]
rs806695	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895879	chr10:90015725-90219298	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv551838	chr10:90058637-90137045	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv482385	chr10:90066140-90259751	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:90042800-90071600	Weak transcription	Psoas Muscle	Psoas
2	chr10:90057000-90075200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr10:90060200-90070800	Weak transcription	Primary B cells from peripheral blood	blood
4	chr10:90063800-90071400	Weak transcription	Lung	lung

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