Variant report

Variant rs10817380
Chromosome Location chr9:115526530-115526531
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:115515200-115536800 Weak transcription Fetal Brain Female brain
2 chr9:115515400-115526600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr9:115516400-115542200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr9:115517200-115528800 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr9:115517400-115526600 Weak transcription H9 Cell Line embryonic stem cell
6 chr9:115517400-115542800 Weak transcription HSMMtube muscle
7 chr9:115518200-115526600 Weak transcription Esophagus oesophagus
8 chr9:115518200-115526600 Weak transcription Left Ventricle heart
9 chr9:115518200-115526800 Weak transcription Stomach Mucosa stomach
10 chr9:115518200-115527000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr9:115518200-115534400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr9:115518600-115526800 Weak transcription Colonic Mucosa Colon
13 chr9:115518600-115526800 Weak transcription Gastric stomach
14 chr9:115518600-115528400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr9:115520200-115534200 Weak transcription Fetal Lung lung
16 chr9:115520400-115534200 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr9:115520400-115541000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr9:115520600-115530400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr9:115520600-115530800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr9:115520600-115531400 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr9:115520600-115534400 Weak transcription Stomach Smooth Muscle stomach
22 chr9:115520800-115540200 Weak transcription NHEK skin
23 chr9:115521000-115530200 Weak transcription Primary monocytes fromperipheralblood blood
24 chr9:115521200-115526600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr9:115521400-115534200 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr9:115522800-115534600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr9:115523000-115526600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr9:115523000-115529000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr9:115523200-115533400 Weak transcription Primary hematopoietic stem cells blood
30 chr9:115523200-115533800 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr9:115523200-115533800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr9:115523400-115526800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr9:115523400-115532200 Weak transcription Fetal Muscle Trunk muscle
34 chr9:115523400-115533800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr9:115524000-115532800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr9:115524600-115526800 Weak transcription Brain Anterior Caudate brain
37 chr9:115524800-115526800 Weak transcription Small Intestine intestine
38 chr9:115525000-115526600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr9:115525200-115526800 Weak transcription GM12878-XiMat blood
40 chr9:115525200-115527000 Weak transcription Ovary ovary
41 chr9:115525200-115532800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr9:115525400-115530200 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr9:115525400-115533800 Weak transcription Primary T cells fromperipheralblood blood
44 chr9:115525400-115546400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr9:115525600-115526600 Weak transcription Placenta Placenta
46 chr9:115525600-115526800 Weak transcription Fetal Stomach stomach
47 chr9:115525600-115528000 Enhancers Fetal Intestine Small intestine
48 chr9:115525600-115529000 Weak transcription Primary B cells from cord blood blood
49 chr9:115526000-115527400 Enhancers Brain Angular Gyrus brain
50 chr9:115526200-115526800 Enhancers HMEC breast

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