Variant report

Variant	rs10826326
Chromosome Location	chr10:61369980-61369981
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10733988	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16914022	1.00[MEX][hapmap]
rs16914038	1.00[MEX][hapmap]
rs1909625	0.89[ASN][1000 genomes]
rs1909637	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs1909641	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs4421701	0.89[ASN][1000 genomes]
rs6481469	0.89[ASN][1000 genomes]
rs7073222	1.00[MEX][hapmap]
rs7911814	1.00[CEU][hapmap]
rs7917618	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895565	chr10:61347537-61379398	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv895566	chr10:61350192-61379398	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv437683	chr10:61354446-61369980	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv437118	chr10:61358382-61372357	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv437119	chr10:61358382-61372357	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv467290	chr10:61358382-61378404	Flanking Active TSS Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
7	nsv467291	chr10:61358382-61378404	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
8	nsv551151	chr10:61358382-61378404	Weak transcription Flanking Active TSS Enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61368800-61373000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr10:61369000-61373800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr10:61369200-61370600	Weak transcription	Placenta	Placenta
4	chr10:61369400-61370000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:61369600-61370000	Enhancers	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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