Variant report

Variant	rs10868916
Chromosome Location	chr9:73472360-73472361
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 72 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:72)

rs_ID	r²[population]
rs10117842	0.89[ASN][1000 genomes]
rs10118452	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10118602	0.99[ASN][1000 genomes]
rs10120927	0.88[ASN][1000 genomes]
rs10121000	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1034542	0.88[ASN][1000 genomes]
rs1034543	0.89[ASN][1000 genomes]
rs10780971	0.89[ASN][1000 genomes]
rs10780972	0.86[ASN][1000 genomes]
rs10780974	1.00[CHB][hapmap];0.84[YRI][hapmap]
rs10780975	1.00[CHB][hapmap];0.96[CHD][hapmap];0.83[YRI][hapmap];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10780976	1.00[CHB][hapmap];0.84[YRI][hapmap];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10780977	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10780978	0.83[ASW][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.95[MEX][hapmap];0.84[YRI][hapmap];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10780980	0.85[ASN][1000 genomes]
rs10780981	0.85[ASN][1000 genomes]
rs10868894	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10868899	0.89[ASN][1000 genomes]
rs10868902	0.99[ASN][1000 genomes]
rs10868903	0.99[ASN][1000 genomes]
rs10868909	0.96[CHD][hapmap]
rs10868911	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10868914	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10868915	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10868917	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs10868918	0.88[ASN][1000 genomes]
rs10868919	0.88[ASN][1000 genomes]
rs10868920	0.88[ASN][1000 genomes]
rs11142611	0.99[ASN][1000 genomes]
rs11142612	0.99[ASN][1000 genomes]
rs11142618	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11142619	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11142625	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12380236	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1337025	0.85[ASN][1000 genomes]
rs1337026	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1337032	0.99[ASN][1000 genomes]
rs1415222	0.85[ASN][1000 genomes]
rs1415223	0.85[ASN][1000 genomes]
rs1415224	0.86[ASN][1000 genomes]
rs1415228	0.96[ASN][1000 genomes]
rs1415229	0.99[ASN][1000 genomes]
rs1415230	0.96[ASN][1000 genomes]
rs1415231	0.97[ASN][1000 genomes]
rs1932926	0.99[ASN][1000 genomes]
rs2039640	0.99[ASN][1000 genomes]
rs2039641	0.99[ASN][1000 genomes]
rs2039645	0.99[ASN][1000 genomes]
rs2275242	0.99[ASN][1000 genomes]
rs34543029	0.88[ASN][1000 genomes]
rs4112753	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4351476	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6560156	0.99[ASN][1000 genomes]
rs6560157	0.99[ASN][1000 genomes]
rs6560158	0.99[ASN][1000 genomes]
rs6560163	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs6560165	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs6560166	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7028011	0.88[ASN][1000 genomes]
rs7028142	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7028680	0.88[ASN][1000 genomes]
rs7028973	0.88[ASN][1000 genomes]
rs7031308	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7045895	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7048214	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7855869	0.99[ASN][1000 genomes]
rs7861318	0.99[ASN][1000 genomes]
rs7864774	0.89[ASN][1000 genomes]
rs7865450	0.83[ASN][1000 genomes]
rs7873530	1.00[CHB][hapmap];0.80[YRI][hapmap];0.85[ASN][1000 genomes]
rs7873539	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs7873917	1.00[CHB][hapmap];0.85[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
2	chr9:73448200-73473600	Weak transcription	Fetal Kidney	kidney
3	chr9:73450600-73477600	Weak transcription	Ovary	ovary
4	chr9:73455600-73480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr9:73457200-73485200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr9:73457800-73480600	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr9:73461400-73482000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr9:73463600-73472800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr9:73466200-73483000	Weak transcription	Fetal Heart	heart
10	chr9:73470200-73473200	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr9:73470200-73475000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr9:73471000-73473200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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