The 2.0 version of rSNPBase

Variant report

Variant rs10874431
Chromosome Location chr1:84614103-84614104
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84588000-84618400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr1:84610200-84621800 Weak transcription Aorta Aorta
3 chr1:84610200-84621800 Weak transcription Small Intestine intestine
4 chr1:84610200-84622000 Weak transcription HSMM muscle
5 chr1:84610400-84614200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:84610400-84633400 Weak transcription Fetal Kidney kidney
7 chr1:84611200-84616800 Weak transcription GM12878-XiMat blood
8 chr1:84611200-84617000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:84611600-84629800 Weak transcription Fetal Stomach stomach
10 chr1:84612000-84615200 Enhancers Primary T helper 17 cells PMA-I stimulated --
11 chr1:84612200-84614800 Flanking Active TSS Primary hematopoietic stem cells blood
12 chr1:84612200-84615200 Weak transcription Duodenum Mucosa Duodenum
13 chr1:84612400-84615000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:84612400-84615200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:84612600-84621400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:84612600-84621400 Weak transcription NHDF-Ad bronchial
17 chr1:84612600-84621600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:84612600-84621800 Weak transcription NH-A brain
19 chr1:84612800-84615200 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr1:84612800-84615400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:84612800-84616200 Weak transcription Fetal Thymus thymus
22 chr1:84612800-84617000 Weak transcription Thymus Thymus
23 chr1:84612800-84621600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:84612800-84628800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:84613200-84614800 Enhancers Primary T regulatory cells fromperipheralblood blood
26 chr1:84613200-84615000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr1:84613200-84623400 Enhancers Primary T helper cells fromperipheralblood blood
28 chr1:84613400-84614600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:84613600-84614800 Enhancers Primary B cells from peripheral blood blood
30 chr1:84613600-84614800 Enhancers Brain Hippocampus Middle brain
31 chr1:84613800-84614400 Enhancers Brain Inferior Temporal Lobe brain
32 chr1:84613800-84614400 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:84613800-84614400 Transcr. at gene 5' and 3' Dnd41 blood
34 chr1:84613800-84614800 Enhancers Primary monocytes fromperipheralblood blood
35 chr1:84613800-84614800 Enhancers Brain Anterior Caudate brain
36 chr1:84614000-84614200 Enhancers Primary B cells from cord blood blood
37 chr1:84614000-84614200 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr1:84614000-84614200 Active TSS Primary T helper naive cells fromperipheralblood blood
39 chr1:84614000-84614200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
40 chr1:84614000-84614200 Weak transcription Brain Substantia Nigra brain
41 chr1:84614000-84614400 Enhancers Primary T cells fromperipheralblood blood
42 chr1:84614000-84614400 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr1:84614000-84614400 Enhancers Monocytes-CD14+_RO01746 blood
44 chr1:84614000-84614600 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr1:84614000-84615200 Enhancers Primary T cells from cord blood blood
46 chr1:84614000-84615600 Enhancers Primary T helper cells PMA-I stimulated --
47 chr1:84614000-84617000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:84614000-84617800 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr1:84614000-84621000 Weak transcription HUVEC blood vessel
50 chr1:84614000-84621200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015