The 2.0 version of rSNPBase

Variant report

Variant rs3768258
Chromosome Location chr1:84670457-84670458
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84652200-84675000 Weak transcription Pancreas Pancrea
2 chr1:84652400-84689800 Weak transcription Aorta Aorta
3 chr1:84653400-84674800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:84657600-84708000 Weak transcription Left Ventricle heart
5 chr1:84659000-84672000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:84659000-84674600 Weak transcription Osteobl bone
7 chr1:84659000-84685000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:84659000-84700600 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr1:84659000-84700800 Weak transcription Colon Smooth Muscle Colon
10 chr1:84659200-84677000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:84659200-84688400 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr1:84659400-84672000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:84659400-84675200 Strong transcription Dnd41 blood
14 chr1:84659400-84677200 Weak transcription Psoas Muscle Psoas
15 chr1:84659400-84685400 Weak transcription Stomach Smooth Muscle stomach
16 chr1:84659600-84672000 Weak transcription HMEC breast
17 chr1:84659600-84673600 Weak transcription Placenta Placenta
18 chr1:84659600-84675000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:84659800-84701400 Weak transcription NHLF lung
20 chr1:84660200-84672400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:84660400-84674400 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr1:84660600-84683200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:84660600-84686200 Weak transcription Fetal Intestine Small intestine
24 chr1:84660800-84688400 Weak transcription Fetal Brain Male brain
25 chr1:84661800-84671600 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr1:84662600-84673400 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:84663200-84671600 Weak transcription HSMM muscle
28 chr1:84663200-84684600 Weak transcription Hela-S3 cervix
29 chr1:84665200-84671400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:84665200-84672000 Weak transcription Fetal Intestine Large intestine
31 chr1:84665200-84672200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:84665200-84700800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:84665400-84671800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:84665400-84671800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:84665400-84672000 Weak transcription Ovary ovary
36 chr1:84665400-84672200 Weak transcription Brain Germinal Matrix brain
37 chr1:84665400-84673800 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr1:84665400-84674800 Weak transcription NH-A brain
39 chr1:84665400-84684000 Weak transcription Brain Hippocampus Middle brain
40 chr1:84665400-84684600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:84665400-84685200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr1:84665400-84687600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr1:84665400-84700600 Weak transcription Colonic Mucosa Colon
44 chr1:84665400-84701000 Weak transcription Fetal Kidney kidney
45 chr1:84665600-84672000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:84665600-84672000 Weak transcription Liver Liver
47 chr1:84665600-84684800 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr1:84665800-84672000 Weak transcription Adipose Nuclei Adipose
49 chr1:84665800-84672000 Weak transcription Fetal Muscle Trunk muscle
50 chr1:84665800-84680200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015