The 2.0 version of rSNPBase

Variant report

Variant rs2134649
Chromosome Location chr1:84662712-84662713
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84640400-84665000 Weak transcription NH-A brain
2 chr1:84652200-84675000 Weak transcription Pancreas Pancrea
3 chr1:84652400-84689800 Weak transcription Aorta Aorta
4 chr1:84653400-84674800 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:84657200-84665400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:84657400-84664800 Weak transcription Brain Angular Gyrus brain
7 chr1:84657400-84665000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:84657600-84708000 Weak transcription Left Ventricle heart
9 chr1:84657800-84665400 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:84658400-84667600 Weak transcription NHDF-Ad bronchial
11 chr1:84658600-84665200 Weak transcription Muscle Satellite Cultured Cells --
12 chr1:84659000-84663800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:84659000-84666600 Weak transcription H1 Cell Line embryonic stem cell
14 chr1:84659000-84672000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:84659000-84674600 Weak transcription Osteobl bone
16 chr1:84659000-84685000 Weak transcription Rectal Smooth Muscle rectum
17 chr1:84659000-84700600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:84659000-84700800 Weak transcription Colon Smooth Muscle Colon
19 chr1:84659200-84662800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:84659200-84677000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:84659200-84688400 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr1:84659400-84662800 Weak transcription Brain Anterior Caudate brain
23 chr1:84659400-84663000 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr1:84659400-84663400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:84659400-84663600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:84659400-84666400 Strong transcription Primary T cells fromperipheralblood blood
27 chr1:84659400-84666600 Strong transcription Primary B cells from peripheral blood blood
28 chr1:84659400-84668000 Strong transcription Fetal Thymus thymus
29 chr1:84659400-84670400 Strong transcription Primary T helper cells fromperipheralblood blood
30 chr1:84659400-84672000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:84659400-84675200 Strong transcription Dnd41 blood
32 chr1:84659400-84677200 Weak transcription Psoas Muscle Psoas
33 chr1:84659400-84685400 Weak transcription Stomach Smooth Muscle stomach
34 chr1:84659600-84662800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:84659600-84663600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:84659600-84665000 Strong transcription Primary B cells from cord blood blood
37 chr1:84659600-84665000 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr1:84659600-84665000 Weak transcription Fetal Muscle Trunk muscle
39 chr1:84659600-84665000 Weak transcription Fetal Muscle Leg muscle
40 chr1:84659600-84665600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:84659600-84672000 Weak transcription HMEC breast
42 chr1:84659600-84673600 Weak transcription Placenta Placenta
43 chr1:84659600-84675000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:84659800-84664600 Weak transcription Ovary ovary
45 chr1:84659800-84665000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:84659800-84665000 Weak transcription Thymus Thymus
47 chr1:84659800-84667400 Weak transcription Duodenum Mucosa Duodenum
48 chr1:84659800-84701400 Weak transcription NHLF lung
49 chr1:84660000-84663400 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr1:84660000-84664000 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015