Variant report

Variant	rs10885806
Chromosome Location	chr10:117522471-117522472
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10490919	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10885797	0.82[EUR][1000 genomes]
rs10885799	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10885801	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10885810	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11197429	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1157117	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12219077	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2243740	0.81[EUR][1000 genomes]
rs2420110	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2420111	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2532709	0.93[EUR][1000 genomes]
rs2804160	0.81[EUR][1000 genomes]
rs2804161	0.83[EUR][1000 genomes]
rs2960715	0.98[EUR][1000 genomes]
rs4600124	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4751930	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72826872	0.81[ASN][1000 genomes]
rs7923360	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117522200-117525600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr10:117522200-117526400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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