Variant report

Variant	rs2960715
Chromosome Location	chr10:117520997-117520998
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs1007581	0.84[CHB][hapmap];0.88[JPT][hapmap]
rs10490916	0.85[CEU][hapmap];0.89[CHB][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]
rs10490919	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10787599	0.84[CEU][hapmap];0.90[CHB][hapmap];0.88[JPT][hapmap];0.81[ASN][1000 genomes]
rs10787606	0.81[JPT][hapmap]
rs10885772	0.87[JPT][hapmap]
rs10885789	0.88[JPT][hapmap]
rs10885797	0.89[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10885799	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10885801	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10885806	0.98[EUR][1000 genomes]
rs10885810	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs10885814	0.89[CHB][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]
rs10885823	0.88[JPT][hapmap]
rs11197429	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11197463	0.87[JPT][hapmap]
rs1157117	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs12219077	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12777802	0.93[JPT][hapmap]
rs12784311	0.93[JPT][hapmap]
rs12784459	0.87[JPT][hapmap]
rs1547948	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs2052066	0.84[CHB][hapmap];0.88[JPT][hapmap]
rs2243740	0.85[CEU][hapmap];0.89[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2286631	0.87[JPT][hapmap]
rs2420109	0.85[CEU][hapmap];0.89[CHB][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]
rs2420110	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2420111	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2420116	0.94[JPT][hapmap]
rs2420124	0.83[CHB][hapmap];0.87[JPT][hapmap]
rs2532709	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2615886	0.87[JPT][hapmap]
rs2615891	0.87[JPT][hapmap]
rs2804160	0.89[CEU][hapmap];0.85[CHB][hapmap];0.88[JPT][hapmap];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2804161	0.89[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2901062	0.81[JPT][hapmap]
rs4420180	0.84[CHB][hapmap];0.88[JPT][hapmap]
rs4529823	0.94[JPT][hapmap]
rs4531378	0.87[JPT][hapmap]
rs4600124	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4751569	0.83[CHB][hapmap];0.87[JPT][hapmap]
rs4751930	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6585362	0.82[CEU][hapmap];0.90[CHB][hapmap];0.94[JPT][hapmap]
rs756497	0.81[JPT][hapmap]
rs7915580	0.82[ASN][1000 genomes]
rs7923360	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs875376	0.83[CHB][hapmap];0.87[JPT][hapmap]
rs9332403	0.82[CEU][hapmap];0.90[CHB][hapmap];0.88[JPT][hapmap];0.81[ASN][1000 genomes]
rs961155	0.83[CHB][hapmap];0.93[JPT][hapmap]
rs979416	0.83[CHB][hapmap];0.87[JPT][hapmap]
rs991389	0.85[CEU][hapmap];0.89[CHB][hapmap];0.88[JPT][hapmap]
rs992888	0.88[JPT][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117520000-117521600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:117520200-117521000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr10:117520200-117521200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr10:117520400-117521000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr10:117520600-117521000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr10:117520800-117521600	Enhancers	HSMM	muscle
7	chr10:117520800-117521800	Enhancers	Skeletal Muscle Male	skeletal muscle

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