Variant report

Variant	rs12219077
Chromosome Location	chr10:117511791-117511792
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10490916	0.81[AMR][1000 genomes]
rs10490919	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10787599	0.82[AMR][1000 genomes]
rs10885797	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10885799	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10885801	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10885806	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10885810	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11197429	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197449	0.81[AMR][1000 genomes]
rs1157117	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12774281	0.83[AMR][1000 genomes]
rs2243740	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2420109	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2420110	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2420111	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2532709	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2804160	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2804161	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2960715	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4600124	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4751930	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7895176	0.81[AMR][1000 genomes]
rs7923360	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9332403	0.81[AMR][1000 genomes]
rs991389	0.81[AMR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117489400-117520800	Weak transcription	HSMM	muscle
2	chr10:117510800-117512600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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