Variant report

Variant	rs10895891
Chromosome Location	chr11:105878381-105878382
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:105876657..105879207-chr11:105895904..105897448,2	K562	blood:
2	chr11:105872692..105874858-chr11:105876640..105880174,4	K562	blood:
3	chr11:105872692..105874858-chr11:105877960..105880174,2	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1043142	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10895889	0.84[ASN][1000 genomes]
rs10895890	0.86[ASN][1000 genomes]
rs11226886	0.86[ASN][1000 genomes]
rs11226887	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs11226890	0.86[ASN][1000 genomes]
rs11226891	0.86[ASN][1000 genomes]
rs11226892	0.87[ASN][1000 genomes]
rs17104835	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1939152	0.80[ASN][1000 genomes]
rs1939826	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2155337	0.84[ASN][1000 genomes]
rs7110414	0.86[ASN][1000 genomes]
rs72979245	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72979260	0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7936460	0.84[ASN][1000 genomes]
rs7943336	0.82[ASN][1000 genomes]

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105848200-105880400	Weak transcription	Fetal Brain Male	brain
2	chr11:105861200-105879200	Weak transcription	HMEC	breast
3	chr11:105862800-105883400	Weak transcription	Psoas Muscle	Psoas
4	chr11:105863000-105880200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr11:105864000-105891600	Weak transcription	Colonic Mucosa	Colon
6	chr11:105865000-105890400	Weak transcription	A549	lung
7	chr11:105865200-105891600	Weak transcription	Hela-S3	cervix
8	chr11:105865400-105880200	Weak transcription	Rectal Smooth Muscle	rectum
9	chr11:105865800-105879800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr11:105866000-105879800	Weak transcription	HUVEC	blood vessel
11	chr11:105867200-105879600	Weak transcription	NHLF	lung
12	chr11:105867400-105878800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr11:105867400-105878800	Weak transcription	Fetal Heart	heart
14	chr11:105870800-105880400	Weak transcription	Esophagus	oesophagus
15	chr11:105871000-105878400	Weak transcription	Brain Substantia Nigra	brain
16	chr11:105871000-105892200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
17	chr11:105873000-105883800	Strong transcription	Dnd41	blood
18	chr11:105873200-105882200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr11:105873800-105878800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
20	chr11:105874000-105881600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr11:105874000-105882400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr11:105874600-105879200	Weak transcription	Placenta	Placenta
23	chr11:105874600-105881800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr11:105874600-105882200	Strong transcription	Fetal Lung	lung
25	chr11:105874600-105883800	Strong transcription	Primary T cells from cord blood	blood
26	chr11:105874800-105879200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
27	chr11:105874800-105879200	Weak transcription	Rectal Mucosa Donor 31	rectum
28	chr11:105874800-105881600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr11:105875000-105878400	Weak transcription	K562	blood
30	chr11:105875400-105880200	Weak transcription	HepG2	liver
31	chr11:105875800-105881800	Strong transcription	ES-I3 Cell Line	embryonic stem cell
32	chr11:105875800-105882200	ZNF genes & repeats	GM12878-XiMat	blood
33	chr11:105875800-105882600	Strong transcription	Primary T cells fromperipheralblood	blood
34	chr11:105876000-105879600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr11:105876000-105881800	Strong transcription	Liver	Liver
36	chr11:105876200-105879800	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr11:105876200-105882800	Strong transcription	Primary T helper cells fromperipheralblood	blood
38	chr11:105876400-105878400	Strong transcription	Brain Angular Gyrus	brain
39	chr11:105876400-105878400	Strong transcription	Brain Inferior Temporal Lobe	brain
40	chr11:105876400-105878600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr11:105876400-105878600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr11:105876400-105879200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr11:105876400-105880400	Strong transcription	Primary B cells from cord blood	blood
44	chr11:105876400-105881200	Strong transcription	Brain Hippocampus Middle	brain
45	chr11:105876400-105881400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr11:105876400-105881400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr11:105876400-105881600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr11:105876400-105881600	Strong transcription	Muscle Satellite Cultured Cells	--
49	chr11:105876400-105881600	Strong transcription	Skeletal Muscle Male	skeletal muscle
50	chr11:105876400-105881800	Strong transcription	Rectal Mucosa Donor 29	rectum

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