The 2.0 version of rSNPBase

Variant report

Variant rs10899800
Chromosome Location chr10:43917684-43917685
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43916600-43917800 Enhancers Stomach Mucosa stomach
2 chr10:43916800-43917800 Enhancers Primary hematopoietic stem cells short term culture blood
3 chr10:43916800-43918000 Enhancers Fetal Intestine Large intestine
4 chr10:43916800-43918000 Enhancers Fetal Intestine Small intestine
5 chr10:43916800-43918000 Enhancers Small Intestine intestine
6 chr10:43916800-43919800 Weak transcription Fetal Lung lung
7 chr10:43916800-43920000 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr10:43916800-43921200 Weak transcription Primary T cells from cord blood blood
9 chr10:43916800-43922400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr10:43916800-43931400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr10:43916800-43931600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr10:43916800-43931600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr10:43917000-43917800 Enhancers K562 blood
14 chr10:43917000-43931600 Weak transcription Fetal Brain Female brain
15 chr10:43917200-43917800 Enhancers Osteobl bone
16 chr10:43917200-43921200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr10:43917200-43921200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr10:43917200-43921200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr10:43917200-43921200 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr10:43917200-43921400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr10:43917200-43921400 Weak transcription GM12878-XiMat blood
22 chr10:43917200-43921600 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr10:43917200-43921600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr10:43917200-43922200 Weak transcription Fetal Thymus thymus
25 chr10:43917200-43922400 Weak transcription Primary hematopoietic stem cells blood
26 chr10:43917200-43930800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr10:43917200-43930800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr10:43917200-43931600 Weak transcription Brain Anterior Caudate brain
29 chr10:43917400-43918000 Enhancers HepG2 liver
30 chr10:43917400-43918200 Weak transcription Brain Inferior Temporal Lobe brain
31 chr10:43917400-43918800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr10:43917400-43918800 Weak transcription Liver Liver
33 chr10:43917400-43919600 Weak transcription Primary monocytes fromperipheralblood blood
34 chr10:43917400-43919800 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr10:43917400-43921200 Weak transcription Primary T cells fromperipheralblood blood
36 chr10:43917400-43921200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr10:43917400-43921200 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr10:43917400-43921200 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr10:43917400-43921600 Weak transcription Primary B cells from peripheral blood blood
40 chr10:43917400-43922400 Weak transcription Primary B cells from cord blood blood
41 chr10:43917400-43930400 Weak transcription Brain Cingulate Gyrus brain
42 chr10:43917400-43930800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr10:43917400-43930800 Weak transcription Brain Hippocampus Middle brain
44 chr10:43917400-43930800 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr10:43917400-43930800 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr10:43917400-43931600 Weak transcription Brain Angular Gyrus brain
47 chr10:43917600-43919000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr10:43917600-43919800 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr10:43917600-43921200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr10:43917600-43922000 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015