Variant report

Variant	rs10993365
Chromosome Location	chr9:97600392-97600393
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:97557777..97559684-chr9:97600038..97601628,2	MCF-7	breast:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1016013	0.85[EUR][1000 genomes]
rs10821401	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10993370	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10993372	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10993377	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10993394	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10993397	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10993398	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10993418	0.83[EUR][1000 genomes]
rs1123534	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11787821	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12235316	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1751434	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs183066	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2183958	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2584806	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28540393	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35487382	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs356131	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs356141	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs368138	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs391784	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs406654	0.81[EUR][1000 genomes]
rs414253	0.83[EUR][1000 genomes]
rs4385527	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs446540	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4744369	0.80[EUR][1000 genomes]
rs4744378	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4744403	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4744411	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7019720	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7026071	0.83[EUR][1000 genomes]
rs7851726	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7853195	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7865239	0.83[EUR][1000 genomes]
rs7866848	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:97570000-97601400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr9:97571800-97622600	Weak transcription	Primary B cells from cord blood	blood
3	chr9:97572000-97601600	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr9:97581800-97609600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr9:97585000-97609600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr9:97589200-97600400	Weak transcription	Primary T cells from cord blood	blood
7	chr9:97589200-97602000	Weak transcription	Lung	lung
8	chr9:97589200-97605400	Weak transcription	Spleen	Spleen
9	chr9:97589200-97609400	Weak transcription	Pancreas	Pancrea
10	chr9:97589200-97622400	Weak transcription	Aorta	Aorta
11	chr9:97590400-97602000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr9:97590600-97609600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr9:97590600-97616000	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr9:97591000-97609200	Weak transcription	Osteobl	bone
15	chr9:97592200-97608400	Weak transcription	HSMMtube	muscle
16	chr9:97592200-97609400	Weak transcription	NHDF-Ad	bronchial
17	chr9:97597200-97603000	Weak transcription	Liver	Liver
18	chr9:97598400-97604600	Weak transcription	HepG2	liver
19	chr9:97599000-97602000	Weak transcription	Stomach Mucosa	stomach
20	chr9:97599600-97600800	Strong transcription	HSMM	muscle
21	chr9:97600000-97609400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr9:97600200-97609600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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