Variant report

Variant	rs11006586
Chromosome Location	chr10:61337476-61337477
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10458677	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10509108	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10740776	0.99[ASN][1000 genomes]
rs10826320	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10826321	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10826324	1.00[ASN][1000 genomes]
rs10826325	0.99[ASN][1000 genomes]
rs11006577	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11006589	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11006593	1.00[ASN][1000 genomes]
rs11006605	0.96[ASN][1000 genomes]
rs12217745	1.00[ASN][1000 genomes]
rs12218834	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12268265	0.97[ASN][1000 genomes]
rs12570492	0.92[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.90[GIH][hapmap];0.94[JPT][hapmap];0.82[MEX][hapmap];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4341489	0.92[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];1.00[LWK][hapmap];0.83[MEX][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862307	0.97[ASN][1000 genomes]
rs7087413	1.00[ASN][1000 genomes]
rs7099911	1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61335600-61339400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr10:61336600-61339600	Weak transcription	Brain Cingulate Gyrus	brain
3	chr10:61337000-61339800	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr10:61337400-61338400	Enhancers	Colon Smooth Muscle	Colon
5	chr10:61337400-61339600	Weak transcription	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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