Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22640102..22643052-chr10:22654931..22656867,2	K562	blood:
2	chr10:22635801..22637889-chr10:22640627..22643492,3	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10508643	0.92[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11012884	1.00[AMR][1000 genomes]
rs11012929	1.00[AMR][1000 genomes]
rs11012930	1.00[AMR][1000 genomes]
rs11012963	0.93[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11813663	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12249265	0.93[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12253809	1.00[AMR][1000 genomes]
rs12257327	0.93[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16922161	1.00[AMR][1000 genomes]
rs2026631	0.83[AFR][1000 genomes]
rs7075793	0.81[YRI][hapmap];0.83[AFR][1000 genomes]
rs7084298	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7088482	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7092238	0.93[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7094794	1.00[AMR][1000 genomes]
rs73596583	1.00[AMR][1000 genomes]
rs73596584	1.00[AMR][1000 genomes]
rs73596585	1.00[AMR][1000 genomes]
rs73596586	1.00[AMR][1000 genomes]
rs7904329	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7911562	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7913154	1.00[AMR][1000 genomes]
rs7913454	1.00[AMR][1000 genomes]
rs9971241	0.93[YRI][hapmap];0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825292	chr10:22560347-22642200	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv825294	chr10:22590627-22644910	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
3	nsv825295	chr10:22591275-22643207	Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22640600-22645400	Weak transcription	K562	blood

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