Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10828347	1.00[ASN][1000 genomes]
rs10828356	0.87[CEU][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs10828385	0.87[CEU][hapmap];1.00[ASN][1000 genomes]
rs10828386	0.85[CEU][hapmap];1.00[ASN][1000 genomes]
rs11013200	0.85[CEU][hapmap];1.00[ASN][1000 genomes]
rs11013202	1.00[CEU][hapmap]
rs11013203	0.85[CEU][hapmap]
rs11013211	1.00[ASN][1000 genomes]
rs11013213	0.87[CEU][hapmap]
rs11013254	1.00[ASN][1000 genomes]
rs11013267	1.00[ASN][1000 genomes]
rs11013268	1.00[ASN][1000 genomes]
rs11492540	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11492541	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11511182	0.86[CEU][hapmap]
rs11511184	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs11592801	1.00[ASN][1000 genomes]
rs11593034	1.00[CEU][hapmap]
rs11593763	0.87[CEU][hapmap];1.00[ASN][1000 genomes]
rs11597797	1.00[ASN][1000 genomes]
rs11598224	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11598272	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11598607	1.00[ASN][1000 genomes]
rs11598621	0.87[CEU][hapmap]
rs11599326	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12356890	1.00[ASN][1000 genomes]
rs12358422	1.00[ASN][1000 genomes]
rs17538592	1.00[CEU][hapmap]
rs7097036	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs7100326	0.85[CEU][hapmap];1.00[ASN][1000 genomes]
rs72800652	1.00[ASN][1000 genomes]
rs73600522	1.00[ASN][1000 genomes]
rs9730948	0.87[CEU][hapmap];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764013	chr10:23087298-23239345	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv894966	chr10:23090535-23202522	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23181600-23185000	Weak transcription	Gastric	stomach
2	chr10:23182000-23183000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:23182200-23184400	Enhancers	Fetal Intestine Small	intestine
4	chr10:23182200-23184600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr10:23182200-23184600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr10:23182400-23183600	Enhancers	Fetal Intestine Large	intestine
7	chr10:23182600-23183200	Enhancers	Fetal Heart	heart
8	chr10:23182600-23184400	Enhancers	Brain Hippocampus Middle	brain

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