Variant report
| Variant | rs11041909 |
|---|---|
| Chromosome Location | chr11:8427069-8427070 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:33)
| rs_ID | r2[population] |
|---|---|
| rs10769912 | 1.00[CEU][hapmap] |
| rs10840046 | 1.00[CEU][hapmap] |
| rs10840049 | 1.00[CEU][hapmap] |
| rs10840053 | 1.00[CEU][hapmap] |
| rs10840059 | 1.00[CEU][hapmap] |
| rs10840069 | 1.00[CEU][hapmap] |
| rs10840071 | 1.00[CEU][hapmap] |
| rs10840074 | 1.00[CEU][hapmap] |
| rs10840088 | 1.00[CEU][hapmap] |
| rs11041891 | 1.00[EUR][1000 genomes] |
| rs11041921 | 1.00[CEU][hapmap] |
| rs11041923 | 1.00[CEU][hapmap] |
| rs11041928 | 1.00[CEU][hapmap] |
| rs11041938 | 1.00[CEU][hapmap] |
| rs11041942 | 1.00[CEU][hapmap] |
| rs11041945 | 1.00[CEU][hapmap] |
| rs11041946 | 1.00[CEU][hapmap] |
| rs11041983 | 1.00[CEU][hapmap] |
| rs11041987 | 1.00[CEU][hapmap] |
| rs11041988 | 1.00[CEU][hapmap] |
| rs11041989 | 1.00[CEU][hapmap] |
| rs11041992 | 1.00[CEU][hapmap] |
| rs12281285 | 1.00[CEU][hapmap] |
| rs12283443 | 1.00[CEU][hapmap] |
| rs12289533 | 1.00[CEU][hapmap] |
| rs12292871 | 1.00[CEU][hapmap] |
| rs12419725 | 1.00[CEU][hapmap] |
| rs1867812 | 1.00[CEU][hapmap] |
| rs4450173 | 1.00[CEU][hapmap] |
| rs7102605 | 1.00[CEU][hapmap] |
| rs7108379 | 1.00[CEU][hapmap] |
| rs7127840 | 1.00[CEU][hapmap] |
| rs7929546 | 1.00[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv1797209 | chr11:8417452-8474015 | Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:8424400-8430200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 2 | chr11:8426600-8447200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
