The 2.0 version of rSNPBase

Variant report

Variant rs11042898
Chromosome Location chr11:10643615-10643616
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10628600-10645600 Weak transcription Brain Anterior Caudate brain
2 chr11:10629400-10643800 Weak transcription Lung lung
3 chr11:10629400-10644600 Weak transcription Esophagus oesophagus
4 chr11:10629400-10650800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr11:10629400-10663600 Weak transcription Fetal Intestine Large intestine
6 chr11:10629600-10662800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr11:10630800-10645200 Weak transcription Brain Hippocampus Middle brain
8 chr11:10633800-10647000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr11:10635800-10643800 Weak transcription Ovary ovary
10 chr11:10635800-10644800 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr11:10635800-10645400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr11:10635800-10646000 Weak transcription Fetal Intestine Small intestine
13 chr11:10637400-10646000 Weak transcription Stomach Mucosa stomach
14 chr11:10637800-10659200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr11:10638800-10645400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr11:10639200-10644600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr11:10639400-10644200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr11:10639600-10644800 Weak transcription NHEK skin
19 chr11:10639800-10644600 Weak transcription Primary hematopoietic stem cells blood
20 chr11:10639800-10644800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr11:10639800-10661600 Weak transcription Gastric stomach
22 chr11:10640400-10644800 Weak transcription Fetal Muscle Leg muscle
23 chr11:10640600-10645000 Weak transcription Right Atrium heart
24 chr11:10640600-10661400 Weak transcription Left Ventricle heart
25 chr11:10640800-10644200 Weak transcription Spleen Spleen
26 chr11:10640800-10645000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr11:10641200-10643800 Weak transcription Primary B cells from cord blood blood
28 chr11:10641400-10644400 Weak transcription Placenta Placenta
29 chr11:10641400-10644600 Weak transcription Rectal Smooth Muscle rectum
30 chr11:10641400-10644800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr11:10642600-10645000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr11:10642600-10647000 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr11:10642800-10645000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr11:10642800-10645000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr11:10642800-10645000 Strong transcription Stomach Smooth Muscle stomach
36 chr11:10642800-10646600 Strong transcription Fetal Stomach stomach
37 chr11:10642800-10647000 Strong transcription Aorta Aorta
38 chr11:10642800-10647400 Enhancers Primary monocytes fromperipheralblood blood
39 chr11:10643000-10644600 Enhancers Primary neutrophils fromperipheralblood blood
40 chr11:10643000-10644600 Strong transcription Colon Smooth Muscle Colon
41 chr11:10643000-10645600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr11:10643400-10644200 Enhancers Monocytes-CD14+_RO01746 blood
43 chr11:10643400-10644800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr11:10643600-10645200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr11:10643600-10652400 Strong transcription NHLF lung
46 chr11:10643600-10653400 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015