Variant report

Variant	rs11130213
Chromosome Location	chr3:49712297-49712298
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr3:49710499-49712438	ECC-1	luminal epithelium:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
2	POLR2A	chr3:49710420-49713358	K562	blood:	n/a	n/a
3	POLR2A	chr3:49710568-49712691	GM12878	blood:	n/a	n/a
4	BHLHE40	chr3:49710768-49712484	K562	blood:	n/a	chr3:49711202-49711218
5	MAX	chr3:49710446-49712549	HCT-116	colon:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
6	CHD2	chr3:49710760-49712326	Hela-S3	cervix:	n/a	chr3:49712219-49712229
7	YY1	chr3:49711931-49712601	H1-hESC	embryonic stem cell:	n/a	chr3:49712551-49712562
8	POLR2A	chr3:49710585-49712418	HepG2	liver:	n/a	n/a
9	SMARCB1	chr3:49710645-49712688	Hela-S3	cervix:	n/a	n/a
10	TFAP2C	chr3:49710776-49712344	Hela-S3	cervix:	n/a	chr3:49711720-49711735
11	CREB1	chr3:49710551-49712452	HepG2	liver:	n/a	n/a
12	MAX	chr3:49710543-49712359	HepG2	liver:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
13	TFAP2A	chr3:49710932-49712334	Hela-S3	cervix:	n/a	chr3:49711103-49711115 chr3:49711724-49711735 chr3:49711557-49711572 chr3:49711103-49711115 chr3:49711724-49711735 chr3:49711363-49711371 chr3:49711724-49711735 chr3:49711720-49711735 chr3:49711103-49711115 chr3:49711724-49711735
14	POLR2A	chr3:49710574-49712418	MCF-7	breast:	n/a	n/a
15	TAF1	chr3:49710792-49712387	ECC-1	luminal epithelium:	n/a	n/a
16	POLR2A	chr3:49709792-49716426	HepG2	liver:	n/a	n/a
17	POLR2A	chr3:49710751-49712348	H1-hESC	embryonic stem cell:	n/a	n/a
18	MAX	chr3:49710579-49712474	H1-hESC	embryonic stem cell:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
19	POLR2A	chr3:49710665-49712416	H1-neurons	neurons:	n/a	n/a
20	MAX	chr3:49710551-49712495	HepG2	liver:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
21	POLR2A	chr3:49710553-49712602	H1-hESC	embryonic stem cell:	n/a	n/a
22	PML	chr3:49710652-49712395	GM12878	blood:	n/a	n/a
23	YY1	chr3:49712051-49712409	GM12891	blood:	n/a	n/a
24	YY1	chr3:49712108-49712393	K562	blood:	n/a	n/a
25	ZBTB7A	chr3:49711216-49712408	ECC-1	luminal epithelium:	n/a	n/a
26	POLR2A	chr3:49710683-49712861	GM12891	blood:	n/a	n/a
27	MAX	chr3:49710493-49712407	K562	blood:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
28	ZBTB7A	chr3:49710612-49712336	ECC-1	luminal epithelium:	n/a	n/a
29	MAZ	chr3:49712264-49712408	K562	blood:	n/a	n/a
30	POLR2A	chr3:49712198-49712417	Hela-S3	cervix:	n/a	n/a
31	POLR2A	chr3:49710455-49712896	GM12892	blood:	n/a	n/a
32	POLR2A	chr3:49710418-49712909	Hela-S3	cervix:	n/a	n/a
33	STAT5A	chr3:49710481-49712458	GM12878	blood:	n/a	chr3:49711212-49711224
34	MYC	chr3:49710569-49712407	K562	blood:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
35	UBTF	chr3:49711107-49712354	K562	blood:	n/a	n/a
36	MAX	chr3:49710575-49712361	NB4	blood:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
37	POLR2A	chr3:49710526-49713165	GM12892	blood:	n/a	n/a
38	MAX	chr3:49710472-49712530	HCT-116	colon:	n/a	chr3:49710764-49710774 chr3:49710765-49710772 chr3:49712213-49712223 chr3:49710763-49710774 chr3:49710762-49710777 chr3:49710764-49710773
39	YY1	chr3:49710601-49712485	HepG2	liver:	n/a	chr3:49710968-49710979 chr3:49711699-49711713 chr3:49711571-49711580
40	POLR2A	chr3:49710588-49712725	Raji	blood:	n/a	n/a
41	RUNX3	chr3:49710774-49712314	GM12878	blood:	n/a	n/a
42	ELF1	chr3:49710547-49712503	GM12878	blood:	n/a	chr3:49711784-49711793 chr3:49711783-49711794 chr3:49711205-49711217
43	YY1	chr3:49712097-49712445	K562	blood:	n/a	n/a
44	POLR2A	chr3:49710521-49712380	ECC-1	luminal epithelium:	n/a	n/a
45	REST	chr3:49710708-49712563	H1-neurons	neurons:	n/a	chr3:49710811-49710825
46	HCFC1	chr3:49710549-49712558	Hela-S3	cervix:	n/a	n/a
47	YY1	chr3:49710975-49712405	GM12892	blood:	n/a	chr3:49711699-49711713 chr3:49711571-49711580
48	ZEB1	chr3:49710973-49712346	GM12878	blood:	n/a	chr3:49712203-49712215 chr3:49712202-49712214
49	TEAD4	chr3:49710996-49712449	ECC-1	luminal epithelium:	n/a	chr3:49711289-49711298
50	YY1	chr3:49711712-49712368	ECC-1	luminal epithelium:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:49709764..49714141-chr3:49724462..49728582,8	MCF-7	breast:
2	chr3:49064195..49067148-chr3:49710210..49713126,3	MCF-7	breast:
3	chr3:49709585..49712525-chr3:49736619..49738353,2	K562	blood:
4	chr3:49506444..49509653-chr3:49710909..49714606,3	K562	blood:
5	chr3:49710197..49713072-chr3:49759630..49762760,3	MCF-7	breast:
6	chr3:49711727..49717769-chr3:49722772..49726950,7	K562	blood:
7	chr3:49711183..49713399-chr3:49759820..49761645,3	K562	blood:
8	chr3:49506494..49510419-chr3:49709515..49713189,4	MCF-7	breast:
9	chr3:49208330..49210147-chr3:49711158..49712878,2	K562	blood:
10	chr3:49711656..49713849-chr3:49736490..49739042,2	MCF-7	breast:
11	chr3:49710552..49715225-chr3:49718907..49727364,14	MCF-7	breast:
12	chr3:49505441..49508480-chr3:49710122..49713377,5	MCF-7	breast:
13	chr3:49709088..49712884-chr3:49714614..49717582,5	MCF-7	breast:
14	chr3:49711233..49713399-chr3:49759820..49762894,3	K562	blood:
15	chr3:49708866..49715375-chr3:49724746..49730407,6	K562	blood:

Variant related genes	Relation type
APEH	TF binding region
ENSG00000173540	Chromatin interaction
ENSG00000259970	Chromatin interaction
ENSG00000164062	Chromatin interaction
ENSG00000164068	Chromatin interaction
ENSG00000178035	Chromatin interaction
ENSG00000173402	Chromatin interaction
ENSG00000272434	Chromatin interaction
ENSG00000173531	Chromatin interaction
ENSG00000185909	Chromatin interaction

Extended variants
information (count: 68 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs1050088	0.82[GIH][hapmap]
rs1060962	0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11130212	0.81[ASN][1000 genomes]
rs1131095	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11709525	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11710037	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11718165	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11720597	0.82[AMR][1000 genomes]
rs11917431	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11919311	0.92[CHD][hapmap];0.85[GIH][hapmap]
rs11921590	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13064576	0.82[AMR][1000 genomes]
rs13085791	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13316695	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1568661	0.82[GIH][hapmap]
rs1801143	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.81[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs1873625	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2005557	0.85[ASN][1000 genomes]
rs2131104	0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2131109	0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2172252	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[YRI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2329020	0.92[CHD][hapmap];0.88[GIH][hapmap]
rs2960548	0.81[ASN][1000 genomes]
rs3197999	0.85[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34762726	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35701831	0.82[GIH][hapmap]
rs3811697	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.82[LWK][hapmap];0.89[MEX][hapmap];0.90[TSI][hapmap]
rs3870338	0.82[GIH][hapmap]
rs3924462	0.82[GIH][hapmap]
rs4283605	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4625	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs4855852	0.92[CHD][hapmap];0.85[GIH][hapmap]
rs4855859	0.82[GIH][hapmap]
rs4855864	0.82[GIH][hapmap]
rs4855881	0.92[CHD][hapmap];0.88[GIH][hapmap];0.81[ASN][1000 genomes]
rs4855883	0.91[ASN][1000 genomes]
rs4855884	1.00[CHB][hapmap];0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs6765869	0.85[ASN][1000 genomes]
rs6766131	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs6770670	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[YRI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6803222	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7614725	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7622302	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs7633271	1.00[CEU][hapmap]
rs7637999	0.82[GIH][hapmap]
rs9811982	1.00[CEU][hapmap]
rs9812791	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9822268	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[LWK][hapmap];0.88[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9823546	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9824092	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9827021	1.00[CEU][hapmap]
rs9827708	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9833611	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9836291	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9837027	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs9837341	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9837520	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9853683	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap]
rs9858213	0.85[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];0.82[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs9858280	1.00[CEU][hapmap];0.97[GIH][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs9858542	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9862080	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9875617	0.85[ASW][hapmap];1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];0.90[TSI][hapmap];0.82[AMR][1000 genomes]
rs9882740	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508217	chr3:49615446-49769896	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	esv1796352	chr3:49687101-49949959	Genic enhancers Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
3	esv1825898	chr3:49688948-49764849	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
4	esv1808511	chr3:49689880-49744825	Active TSS Flanking Active TSS Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs11130213	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs11130213	MYL3	cis	parietal	SCAN
rs11130213	FAM212A	cis	Muscle Skeletal	GTEx
rs11130213	RNF123	cis	parietal	SCAN
rs11130213	ZNF589	cis	parietal	SCAN
rs11130213	IP6K2	cis	cerebellum	SCAN
rs11130213	CELSR3	cis	cerebellum	SCAN
rs11130213	RBM6	cis	cerebellum	SCAN
rs11130213	PARP3	cis	parietal	SCAN
rs11130213	GPX1	cis	parietal	SCAN
rs11130213	IHPK2	Cis_1M	lymphoblastoid	RTeQTL
rs11130213	RNF123	cis	cerebellum	SCAN
rs11130213	CISH	cis	lymphoblastoid	seeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49710400-49712400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:49710600-49712400	Active TSS	iPS-18 Cell Line	embryonic stem cell
3	chr3:49710600-49712400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr3:49710600-49712400	Active TSS	Colon Smooth Muscle	Colon
5	chr3:49710600-49712400	Active TSS	NHLF	lung
6	chr3:49710600-49712600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr3:49710600-49712600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr3:49710600-49712600	Active TSS	Pancreatic Islets	Pancreatic Islet
9	chr3:49710600-49712800	Active TSS	ES-I3 Cell Line	embryonic stem cell
10	chr3:49710600-49713000	Active TSS	HUES48 Cell Line	embryonic stem cell
11	chr3:49710600-49713000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr3:49710800-49712400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr3:49710800-49712400	Active TSS	iPS-15b Cell Line	embryonic stem cell
14	chr3:49710800-49712400	Active TSS	iPS-20b Cell Line	embryonic stem cell
15	chr3:49710800-49712400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr3:49710800-49712400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr3:49710800-49712400	Active TSS	Aorta	Aorta
18	chr3:49710800-49712400	Active TSS	Gastric	stomach
19	chr3:49710800-49712400	Active TSS	A549	lung
20	chr3:49710800-49712600	Active TSS	H9 Cell Line	embryonic stem cell
21	chr3:49711000-49712400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr3:49711000-49712400	Active TSS	HUES6 Cell Line	embryonic stem cell
23	chr3:49711000-49712400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr3:49711000-49712400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr3:49711000-49712400	Active TSS	Ovary	ovary
26	chr3:49711000-49712400	Active TSS	Rectal Smooth Muscle	rectum
27	chr3:49711000-49712400	Active TSS	Sigmoid Colon	Sigmoid Colon
28	chr3:49711000-49712400	Active TSS	Small Intestine	intestine
29	chr3:49711000-49712400	Active TSS	Stomach Mucosa	stomach
30	chr3:49711000-49712400	Active TSS	Thymus	Thymus
31	chr3:49711000-49712400	Active TSS	Hela-S3	cervix
32	chr3:49711000-49712400	Active TSS	HSMM	muscle
33	chr3:49711000-49712400	Active TSS	K562	blood
34	chr3:49711000-49712600	Active TSS	NHDF-Ad	bronchial
35	chr3:49711000-49712800	Active TSS	HUES64 Cell Line	embryonic stem cell
36	chr3:49711000-49712800	Active TSS	Fetal Kidney	kidney
37	chr3:49711000-49712800	Active TSS	HSMMtube	muscle
38	chr3:49711000-49713000	Active TSS	Fetal Brain Female	brain
39	chr3:49711200-49712400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
40	chr3:49711200-49712400	Active TSS	Primary T cells from cord blood	blood
41	chr3:49711200-49712400	Active TSS	Fetal Intestine Large	intestine
42	chr3:49711200-49712400	Active TSS	Fetal Intestine Small	intestine
43	chr3:49711200-49712400	Active TSS	GM12878-XiMat	blood
44	chr3:49711200-49712400	Active TSS	HepG2	liver
45	chr3:49711200-49712400	Active TSS	NHEK	skin
46	chr3:49711200-49712400	Active TSS	Osteobl	bone
47	chr3:49711600-49714600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr3:49711800-49712600	Flanking Active TSS	Primary hematopoietic stem cells	blood
49	chr3:49711800-49712600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
50	chr3:49711800-49712600	Flanking Active TSS	Brain Germinal Matrix	brain

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