Variant report

Variant	rs6766131
Chromosome Location	chr3:49538932-49538933
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:49507792..49509395-chr3:49538517..49540372,2	MCF-7	breast:

Extended variants
information (count: 145 )
Associated
traits (count: 15 )

rSNPs within LD-proxies of this variant (count:144)

rs_ID	r²[population]
rs10212296	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1050088	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1050450	0.85[AMR][1000 genomes]
rs1060962	0.85[GIH][hapmap]
rs10640	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.94[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.83[YRI][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10865955	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11130192	1.00[JPT][hapmap]
rs11130199	0.93[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11130202	0.94[ASN][1000 genomes]
rs11130203	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130206	0.84[ASN][1000 genomes]
rs11130213	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs1131095	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs11706370	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11708955	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11709525	1.00[CEU][hapmap];0.85[CHD][hapmap];0.94[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.87[TSI][hapmap]
rs11711485	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];0.90[TSI][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11711536	0.82[AMR][1000 genomes]
rs11712569	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11713474	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11715915	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11716974	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11718165	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs11719996	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11720264	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11720458	0.86[ASN][1000 genomes]
rs11720597	0.86[EUR][1000 genomes]
rs11919311	0.88[GIH][hapmap];0.86[JPT][hapmap]
rs11922013	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11926781	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12330269	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12488065	0.88[ASN][1000 genomes]
rs12489092	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs13062429	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13064576	0.84[EUR][1000 genomes]
rs13078949	0.85[GIH][hapmap]
rs13079082	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13079643	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs13085791	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs13087851	0.83[AMR][1000 genomes]
rs13090388	0.85[AMR][1000 genomes]
rs1464566	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1464567	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1464568	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1568661	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs17080528	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs17650792	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1800668	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes]
rs1801143	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1873625	1.00[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.94[MEX][hapmap];0.93[TSI][hapmap]
rs1873626	0.86[JPT][hapmap]
rs1987628	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes]
rs2131104	0.85[GIH][hapmap]
rs2131109	0.85[GIH][hapmap]
rs2172252	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs2312461	0.94[ASN][1000 genomes]
rs2329020	0.85[GIH][hapmap];0.86[JPT][hapmap]
rs3197999	0.95[CEU][hapmap];0.85[CHD][hapmap];0.90[GIH][hapmap];0.86[JPT][hapmap];0.94[MEX][hapmap];0.87[TSI][hapmap]
rs34196454	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34293138	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34363169	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34427167	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34588335	0.85[AMR][1000 genomes]
rs34762726	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.90[TSI][hapmap]
rs35115732	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35169793	0.85[AMR][1000 genomes]
rs35261698	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35701831	0.86[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs35999162	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3811697	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3811699	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs3870337	0.94[ASN][1000 genomes]
rs3870338	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3877784	0.94[ASN][1000 genomes]
rs3924462	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3926569	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4241406	0.86[ASN][1000 genomes]
rs4283605	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.90[TSI][hapmap]
rs4625	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4855836	0.94[ASN][1000 genomes]
rs4855839	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855842	1.00[JPT][hapmap]
rs4855852	0.88[GIH][hapmap];0.86[JPT][hapmap]
rs4855855	0.85[ASN][1000 genomes]
rs4855859	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs4855861	0.94[ASN][1000 genomes]
rs4855864	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs4855866	0.80[ASN][1000 genomes]
rs4855873	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855877	1.00[JPT][hapmap]
rs4855881	0.85[GIH][hapmap];0.86[JPT][hapmap]
rs4855884	0.85[GIH][hapmap]
rs56116382	0.87[ASN][1000 genomes]
rs62261185	0.81[ASN][1000 genomes]
rs6446264	0.83[AMR][1000 genomes]
rs6446272	1.00[ASW][hapmap];0.94[CEU][hapmap];0.86[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6446277	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs67216675	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67485053	0.83[AMR][1000 genomes]
rs6766581	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6770670	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs6779524	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6782577	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs6784820	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs6793308	0.85[AMR][1000 genomes]
rs6797664	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6803222	1.00[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.94[MEX][hapmap];0.92[TSI][hapmap]
rs6809216	0.85[AMR][1000 genomes]
rs6997	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs71324962	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs71615484	0.96[ASN][1000 genomes]
rs7371895	0.82[ASN][1000 genomes]
rs7622302	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7623659	0.85[AMR][1000 genomes]
rs7630869	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7633271	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7637999	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7643845	0.94[ASN][1000 genomes]
rs7646366	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.94[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7648841	0.83[AMR][1000 genomes]
rs885592	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9811982	1.00[CEU][hapmap]
rs9812791	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.90[TSI][hapmap]
rs9814873	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9818590	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9821311	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9822268	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.88[LWK][hapmap];0.94[MEX][hapmap];0.88[MKK][hapmap];0.87[TSI][hapmap]
rs9823546	1.00[CEU][hapmap]
rs9827021	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9827708	1.00[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.93[TSI][hapmap]
rs9837027	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9837341	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs9841110	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9850072	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9853683	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9858213	0.89[CEU][hapmap];0.81[GIH][hapmap];0.89[MEX][hapmap]
rs9858280	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9858418	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9858542	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs9859556	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9871380	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9875617	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.87[EUR][1000 genomes]
rs9878943	1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9882740	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834687	chr3:49448632-49631788	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases

mRNA abundance (count:15)

SNP	Gene	Cis/trans	Tissue	Source
rs6766131	KDM5B	trans	lymphoblastoid	seeQTL
rs6766131	RBM6	cis	cerebellum	SCAN
rs6766131	IHPK2	Cis_1M	lymphoblastoid	RTeQTL
rs6766131	IP6K2	cis	cerebellum	SCAN
rs6766131	FAM212A	cis	Muscle Skeletal	GTEx
rs6766131	GPX1	cis	parietal	SCAN
rs6766131	ZNF589	cis	parietal	SCAN
rs6766131	PARP3	cis	parietal	SCAN
rs6766131	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs6766131	NBEAL2	cis	cerebellum	SCAN
rs6766131	AMT	cis	parietal	SCAN
rs6766131	NICN1	cis	cerebellum	SCAN
rs6766131	CISH	cis	parietal	SCAN
rs6766131	RNF123	cis	parietal	SCAN
rs6766131	RNF123	cis	cerebellum	SCAN

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49509800-49547800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
2	chr3:49510000-49547800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr3:49514600-49548000	Weak transcription	Primary hematopoietic stem cells	blood
4	chr3:49515400-49547800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr3:49515400-49547800	Weak transcription	Fetal Brain Female	brain
6	chr3:49515400-49548800	Weak transcription	Esophagus	oesophagus
7	chr3:49517000-49547800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr3:49517200-49547800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr3:49522200-49547800	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr3:49522400-49548000	Weak transcription	Spleen	Spleen
11	chr3:49523400-49548000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr3:49523400-49548000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr3:49523600-49548200	Weak transcription	Brain Substantia Nigra	brain
14	chr3:49526000-49547800	Weak transcription	Dnd41	blood
15	chr3:49526000-49548000	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr3:49527600-49547800	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr3:49528200-49539600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr3:49529600-49568600	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr3:49530400-49547800	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr3:49531000-49548000	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr3:49531200-49547800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr3:49531400-49539600	Weak transcription	Fetal Stomach	stomach
23	chr3:49531400-49547600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
24	chr3:49531400-49547800	Weak transcription	H1 Cell Line	embryonic stem cell
25	chr3:49531400-49547800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr3:49531400-49547800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr3:49531600-49539200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr3:49531600-49547800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr3:49531600-49547800	Weak transcription	Cortex derived primary cultured neurospheres	brain
30	chr3:49531600-49547800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr3:49531800-49539600	Weak transcription	Primary T cells from cord blood	blood
32	chr3:49531800-49547400	Weak transcription	Primary T cells fromperipheralblood	blood
33	chr3:49531800-49547800	Weak transcription	Brain Germinal Matrix	brain
34	chr3:49533000-49547800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
35	chr3:49533000-49547800	Weak transcription	Primary T helper cells fromperipheralblood	blood
36	chr3:49533000-49547800	Weak transcription	Ovary	ovary
37	chr3:49533000-49547800	Weak transcription	GM12878-XiMat	blood
38	chr3:49533200-49540400	Weak transcription	Primary B cells from cord blood	blood
39	chr3:49533200-49541000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
40	chr3:49533800-49547800	Weak transcription	Thymus	Thymus
41	chr3:49534800-49539000	Enhancers	Liver	Liver
42	chr3:49535200-49539600	Enhancers	Fetal Intestine Small	intestine
43	chr3:49535400-49539000	Enhancers	Stomach Mucosa	stomach
44	chr3:49535400-49539400	Enhancers	Fetal Muscle Leg	muscle
45	chr3:49535400-49539800	Enhancers	Fetal Intestine Large	intestine
46	chr3:49535600-49539600	Enhancers	Small Intestine	intestine
47	chr3:49536200-49539200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr3:49536400-49539400	Enhancers	Breast Myoepithelial Primary Cells	Breast
49	chr3:49536600-49548000	Weak transcription	Duodenum Smooth Muscle	Duodenum
50	chr3:49536800-49540000	Enhancers	Right Atrium	heart

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