Variant report

Variant	rs10865955
Chromosome Location	chr3:49499829-49499830
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:49493317..49496589-chr3:49498122..49502213,4	K562	blood:
2	chr3:49494808..49501210-chr3:49505386..49509341,14	MCF-7	breast:
3	chr3:49025870..49028147-chr3:49498822..49500854,2	K562	blood:
4	chr3:49492720..49494835-chr3:49497709..49500473,4	MCF-7	breast:
5	chr3:49496719..49502585-chr3:49503472..49509213,13	MCF-7	breast:
6	chr3:49498857..49499838-chr3:49507126..49508292,3	MCF-7	breast:
7	chr3:49054424..49056123-chr3:49498434..49500923,2	K562	blood:
8	chr3:49452077..49454427-chr3:49496570..49500540,3	MCF-7	breast:
9	chr3:49499007..49500674-chr3:49711634..49713194,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000178149	Chromatin interaction
ENSG00000223343	Chromatin interaction
ENSG00000173402	Chromatin interaction
ENSG00000178467	Chromatin interaction
ENSG00000201301	Chromatin interaction
ENSG00000164062	Chromatin interaction

Extended variants
information (count: 129 )
Associated
traits (count: 19 )

rSNPs within LD-proxies of this variant (count:128)

rs_ID	r²[population]
rs1050088	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10640	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs11130192	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11130193	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11130194	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11130196	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11130199	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11130202	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11130203	0.82[ASN][1000 genomes]
rs11130206	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11706370	1.00[JPT][hapmap]
rs11709525	0.86[JPT][hapmap]
rs11711485	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11712569	0.82[ASN][1000 genomes]
rs11715915	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs11718165	0.82[GIH][hapmap]
rs11719996	0.82[ASN][1000 genomes]
rs11720264	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11720458	0.81[ASN][1000 genomes]
rs11919311	0.86[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.83[MEX][hapmap]
rs11922013	1.00[JPT][hapmap]
rs12330269	0.82[ASN][1000 genomes]
rs12488065	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12489092	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13078949	0.93[ASW][hapmap];0.85[CEU][hapmap];0.88[CHB][hapmap];1.00[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap]
rs13079082	0.82[ASN][1000 genomes]
rs13079643	0.86[ASN][1000 genomes]
rs13096760	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1464566	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1464567	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1464568	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1568661	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1568662	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17080528	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs17595772	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17650792	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1800668	1.00[JPT][hapmap]
rs1801143	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1826347	0.82[MEX][hapmap]
rs1873625	0.85[GIH][hapmap];0.86[JPT][hapmap]
rs1873626	0.86[JPT][hapmap]
rs1987628	1.00[JPT][hapmap]
rs2117939	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2131104	0.86[CHD][hapmap];0.94[GIH][hapmap];0.83[MEX][hapmap]
rs2172252	0.86[JPT][hapmap]
rs2312461	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2329020	0.86[ASW][hapmap];0.86[CHD][hapmap];0.94[GIH][hapmap];0.86[JPT][hapmap];1.00[LWK][hapmap];0.83[MEX][hapmap];0.93[MKK][hapmap];0.96[YRI][hapmap]
rs2878298	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34293138	0.82[ASN][1000 genomes]
rs34363169	0.82[ASN][1000 genomes]
rs34762726	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs34937635	0.85[EUR][1000 genomes]
rs35115732	0.86[ASN][1000 genomes]
rs35261698	0.82[ASN][1000 genomes]
rs35701831	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3811697	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs3811699	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs3870337	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3870338	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3877784	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3924462	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3924463	0.92[EUR][1000 genomes]
rs4241406	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4241408	0.92[EUR][1000 genomes]
rs4283605	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs4459909	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4563439	0.82[EUR][1000 genomes]
rs4625	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs4855836	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4855839	1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4855842	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs4855843	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4855852	0.86[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.83[MEX][hapmap]
rs4855855	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4855859	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.95[MEX][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4855861	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4855864	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4855866	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4855873	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4855877	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4955412	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55957735	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs59152804	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62259939	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62259942	0.81[AMR][1000 genomes]
rs62261185	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6446272	0.86[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs6446274	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6446277	0.86[ASN][1000 genomes]
rs67216675	0.94[ASN][1000 genomes]
rs6766131	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs6766581	0.82[ASN][1000 genomes]
rs6770670	0.86[JPT][hapmap]
rs6773518	0.88[EUR][1000 genomes]
rs6779524	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs6782577	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs6784820	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6792911	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6797664	0.82[ASN][1000 genomes]
rs6797765	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6803222	0.85[GIH][hapmap];0.86[JPT][hapmap]
rs6997	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs71324962	0.86[ASN][1000 genomes]
rs7371895	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7373849	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7621003	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7622302	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7631908	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7633271	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7637665	0.88[EUR][1000 genomes]
rs7637999	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7643586	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7643845	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7645445	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7646366	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs885592	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap];0.88[YRI][hapmap];0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9812791	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs9814873	0.92[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs9818590	0.82[ASN][1000 genomes]
rs9827021	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9827708	0.85[GIH][hapmap];0.86[JPT][hapmap]
rs9837027	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9837341	0.86[JPT][hapmap]
rs9841110	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9850072	0.82[ASN][1000 genomes]
rs9853683	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9858280	0.86[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs9875617	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834687	chr3:49448632-49631788	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases

mRNA abundance (count:19)

SNP	Gene	Cis/trans	Tissue	Source
rs10865955	WDR6	cis	Muscle Skeletal	GTEx
rs10865955	WDR6	cis	Adipose Subcutaneous	GTEx
rs10865955	DALRD3	cis	cerebellum	SCAN
rs10865955	WDR6	cis	parietal	SCAN
rs10865955	GNL3	cis	cerebellum	SCAN
rs10865955	WDR6	cis	Nerve Tibial	GTEx
rs10865955	WDR6	cis	Whole Blood	GTEx
rs10865955	WDR6	cis	Artery Tibial	GTEx
rs10865955	QRICH1	cis	parietal	SCAN
rs10865955	IP6K2	cis	cerebellum	SCAN
rs10865955	AMT	cis	cerebellum	SCAN
rs10865955	WDR6	cis	Skin Sun Exposed Lower leg	GTEx
rs10865955	WDR6	cis	cerebellum	SCAN
rs10865955	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs10865955	CCDC71	cis	cerebellum	SCAN
rs10865955	WDR6	cis	lung	GTEx
rs10865955	P4HTM	cis	parietal	SCAN
rs10865955	P4HTM	cis	cerebellum	SCAN
rs10865955	AMT	cis	Thyroid	GTEx

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49490600-49506600	Enhancers	Fetal Muscle Leg	muscle
2	chr3:49491800-49506200	Enhancers	Placenta	Placenta
3	chr3:49494600-49501800	Enhancers	Fetal Muscle Trunk	muscle
4	chr3:49496000-49500000	Enhancers	Muscle Satellite Cultured Cells	--
5	chr3:49496000-49501400	Enhancers	Pancreas	Pancrea
6	chr3:49496200-49500000	Enhancers	H1 Cell Line	embryonic stem cell
7	chr3:49496200-49500000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr3:49496200-49500000	Enhancers	H9 Cell Line	embryonic stem cell
9	chr3:49496200-49500000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr3:49496200-49500000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr3:49496200-49500000	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr3:49496200-49500000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr3:49496200-49500000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr3:49496200-49500000	Enhancers	HSMM	muscle
15	chr3:49496200-49500000	Enhancers	HSMMtube	muscle
16	chr3:49496200-49500200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr3:49496200-49501200	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr3:49496200-49501200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr3:49496200-49501200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr3:49496400-49500000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr3:49496400-49500000	Enhancers	Fetal Intestine Large	intestine
22	chr3:49496400-49500000	Enhancers	Skeletal Muscle Male	skeletal muscle
23	chr3:49496400-49500200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr3:49496400-49501200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
25	chr3:49496400-49501400	Enhancers	Breast Myoepithelial Primary Cells	Breast
26	chr3:49496800-49500000	Enhancers	Fetal Intestine Small	intestine
27	chr3:49497400-49506400	Weak transcription	Brain Germinal Matrix	brain
28	chr3:49497600-49500000	Enhancers	Placenta Amnion	Placenta Amnion
29	chr3:49497800-49500000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr3:49497800-49500000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr3:49498000-49500000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr3:49498000-49500000	Enhancers	Stomach Mucosa	stomach
33	chr3:49498000-49506000	Weak transcription	Fetal Stomach	stomach
34	chr3:49498200-49500000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr3:49498200-49500000	Enhancers	Fetal Thymus	thymus
36	chr3:49498400-49500000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr3:49498400-49500000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
38	chr3:49498600-49500000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr3:49498600-49500000	Enhancers	Duodenum Mucosa	Duodenum
40	chr3:49498600-49500000	Enhancers	Left Ventricle	heart
41	chr3:49498600-49500000	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr3:49498600-49500000	Enhancers	NHLF	lung
43	chr3:49498800-49500000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr3:49498800-49500000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr3:49498800-49500000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr3:49498800-49500000	Enhancers	Adipose Nuclei	Adipose
47	chr3:49498800-49500000	Enhancers	Gastric	stomach
48	chr3:49498800-49500000	Enhancers	Psoas Muscle	Psoas
49	chr3:49498800-49500000	Enhancers	Rectal Mucosa Donor 31	rectum
50	chr3:49498800-49500000	Flanking Active TSS	A549	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links