Variant report

Variant	rs6997
Chromosome Location	chr3:49453834-49453835
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr3:49453559-49454124	NB4	blood:	n/a	n/a
2	POLR2A	chr3:49453792-49454028	HUVEC	blood vessel:	n/a	n/a
3	SPI1	chr3:49453636-49454033	GM12891	blood:	n/a	n/a
4	POLR2A	chr3:49453022-49454928	GM12892	blood:	n/a	n/a
5	POLR2A	chr3:49452855-49454130	HepG2	liver:	n/a	n/a
6	POLR2A	chr3:49453106-49454137	GM12891	blood:	n/a	n/a
7	RELA	chr3:49453063-49454171	GM12891	blood:	n/a	n/a
8	MTA3	chr3:49452886-49454772	GM12878	blood:	n/a	n/a
9	POLR2A	chr3:49453069-49454188	GM12891	blood:	n/a	n/a
10	PML	chr3:49453196-49454219	GM12878	blood:	n/a	n/a
11	YY1	chr3:49453720-49454019	K562	blood:	n/a	n/a
12	ELF1	chr3:49453495-49454205	GM12878	blood:	n/a	chr3:49453894-49453907
13	POLR2A	chr3:49453196-49454088	GM12892	blood:	n/a	n/a
14	POLR2A	chr3:49453054-49454928	GM12891	blood:	n/a	n/a
15	POLR2A	chr3:49453675-49453958	HepG2	liver:	n/a	n/a
16	RELA	chr3:49453108-49454094	GM15510	blood:	n/a	n/a
17	POLR2A	chr3:49453159-49454154	GM12891	blood:	n/a	n/a
18	POLR2A	chr3:49452978-49454414	GM12878	blood:	n/a	n/a
19	POLR2A	chr3:49453496-49454169	PFSK-1	brain:	n/a	n/a
20	YY1	chr3:49453408-49453872	GM12891	blood:	n/a	n/a
21	POLR2A	chr3:49453587-49454139	SK-N-MC	brain:	n/a	n/a
22	EBF1	chr3:49453359-49454221	GM12878	blood:	n/a	chr3:49454043-49454052 chr3:49453990-49454001
23	RUNX3	chr3:49453236-49454285	GM12878	blood:	n/a	n/a
24	REST	chr3:49453683-49454097	PFSK-1	brain:	n/a	chr3:49454039-49454049
25	POLR2A	chr3:49452933-49454144	GM12892	blood:	n/a	n/a
26	RELA	chr3:49453132-49454084	GM19193	blood:	n/a	n/a
27	EP300	chr3:49453230-49454124	GM12878	blood:	n/a	chr3:49454039-49454055
28	PAX5	chr3:49453428-49454153	GM12878	blood:	n/a	n/a
29	MAX	chr3:49453190-49454013	GM12878	blood:	n/a	n/a
30	POLR2A	chr3:49453791-49454082	GM12878	blood:	n/a	n/a
31	NFATC1	chr3:49453035-49454112	GM12878	blood:	n/a	n/a
32	POLR2A	chr3:49452801-49454197	GM12878	blood:	n/a	n/a
33	SPI1	chr3:49453479-49454342	HL-60	blood:	n/a	n/a
34	POU2F2	chr3:49453359-49454063	GM12891	blood:	n/a	n/a
35	SPI1	chr3:49453781-49453995	GM12878	blood:	n/a	n/a
36	POLR2A	chr3:49453557-49453998	GM12891	blood:	n/a	n/a
37	SPI1	chr3:49453648-49454065	GM12878	blood:	n/a	n/a
38	ATF2	chr3:49453253-49454094	GM12878	blood:	n/a	n/a
39	SPI1	chr3:49453548-49454134	GM12878	blood:	n/a	n/a
40	POLR2A	chr3:49452993-49456018	HepG2	liver:	n/a	n/a
41	IKZF1	chr3:49453579-49454112	GM12878	blood:	n/a	n/a
42	ELF1	chr3:49453827-49454141	GM12878	blood:	n/a	chr3:49453894-49453907
43	RELA	chr3:49453371-49454026	GM10847	blood:	n/a	n/a
44	RELA	chr3:49453036-49454101	GM19099	blood:	n/a	n/a
45	RELA	chr3:49453205-49454327	GM18951	blood:	n/a	n/a
46	POLR2A	chr3:49453055-49454791	GM12892	blood:	n/a	n/a
47	SPI1	chr3:49453739-49454106	HL-60	blood:	n/a	n/a
48	SPI1	chr3:49453650-49454033	GM12891	blood:	n/a	n/a
49	NFIC	chr3:49453360-49454176	GM12878	blood:	n/a	n/a
50	POLR2A	chr3:49453833-49454019	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:49453095..49455056-chr3:49457892..49460784,2	K562	blood:
2	chr3:49453314..49456247-chr3:49456435..49459274,2	MCF-7	breast:
3	chr3:49452077..49454427-chr3:49496570..49500540,3	MCF-7	breast:

Variant related genes	Relation type
RHOA	TF binding region
ENSG00000145020	Chromatin interaction
ENSG00000235261	Chromatin interaction

Extended variants
information (count: 106 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:105)

rs_ID	r²[population]
rs10212296	0.81[AMR][1000 genomes]
rs1050088	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1050450	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10640	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10865955	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs11130192	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11130193	0.83[ASN][1000 genomes]
rs11130196	0.82[ASN][1000 genomes]
rs11130199	0.93[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs11706370	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11711485	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.88[TSI][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11711536	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11712569	0.83[AMR][1000 genomes]
rs11713474	0.83[AMR][1000 genomes]
rs11715915	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11716974	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11719996	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11720264	1.00[JPT][hapmap]
rs11922013	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11926781	0.82[AMR][1000 genomes]
rs12330269	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12489092	1.00[JPT][hapmap]
rs13078949	0.85[GIH][hapmap]
rs13079082	0.85[AMR][1000 genomes]
rs13079643	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13086611	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13087851	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13090388	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1464566	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1464567	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1464568	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1568661	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs17080528	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17650792	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1800668	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1801143	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs1987628	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34196454	0.83[AMR][1000 genomes]
rs34293138	0.86[AMR][1000 genomes]
rs34363169	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34427167	0.82[AMR][1000 genomes]
rs34588335	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34937635	0.87[ASN][1000 genomes]
rs35115732	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35169793	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35261698	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35701831	0.86[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs35999162	0.80[AMR][1000 genomes]
rs3811697	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes]
rs3811699	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3870338	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs3924462	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs3926569	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4459909	0.94[ASN][1000 genomes]
rs4625	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs4855839	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855842	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs4855843	0.83[ASN][1000 genomes]
rs4855852	0.88[GIH][hapmap];0.86[JPT][hapmap]
rs4855859	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855864	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855873	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs4855877	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs55957735	0.92[ASN][1000 genomes]
rs6446264	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6446272	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6446274	0.87[ASN][1000 genomes]
rs6446277	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67216675	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs67485053	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6766131	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6766581	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6779524	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6782577	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs6784820	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs6792911	0.86[ASN][1000 genomes]
rs6793308	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6797664	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6809216	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs71324962	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7622302	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.97[TSI][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7623659	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7630869	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7633271	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7637999	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs7643586	0.86[ASN][1000 genomes]
rs7646366	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7648841	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs885592	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs9811982	1.00[CEU][hapmap]
rs9814873	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9818590	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9821311	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9827021	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9827708	1.00[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.80[MKK][hapmap];0.90[TSI][hapmap]
rs9837027	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes]
rs9841110	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9850072	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9853683	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap];0.83[YRI][hapmap];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9858280	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes]
rs9858418	0.85[AMR][1000 genomes]
rs9859556	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9871380	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9875617	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.83[MKK][hapmap];0.97[TSI][hapmap];0.83[YRI][hapmap]
rs9878943	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834687	chr3:49448632-49631788	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs6997	NBEAL2	cis	cerebellum	SCAN
rs6997	RBM6	cis	cerebellum	SCAN
rs6997	ZNF589	cis	parietal	SCAN
rs6997	AMT	cis	parietal	SCAN
rs6997	RNF123	cis	parietal	SCAN
rs6997	IP6K2	cis	cerebellum	SCAN
rs6997	FAM212A	cis	Muscle Skeletal	GTEx
rs6997	NICN1	cis	cerebellum	SCAN
rs6997	RNF123	cis	cerebellum	SCAN
rs6997	KDM5B	trans	lymphoblastoid	seeQTL
rs6997	USP4	cis	multi-tissue	Pritchard
rs6997	CISH	cis	parietal	SCAN
rs6997	GPX1	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49450400-49459000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:49450400-49459400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr3:49450600-49454400	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr3:49450600-49454600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr3:49450600-49459000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr3:49450800-49454000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr3:49450800-49454200	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr3:49450800-49454400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr3:49450800-49455400	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr3:49450800-49457800	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
11	chr3:49450800-49459000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr3:49450800-49459200	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr3:49450800-49459200	Genic enhancers	Placenta	Placenta
14	chr3:49451000-49454400	Weak transcription	Fetal Kidney	kidney
15	chr3:49451000-49458000	Weak transcription	Small Intestine	intestine
16	chr3:49451200-49455000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr3:49451200-49459000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr3:49451200-49459400	Weak transcription	Fetal Brain Male	brain
19	chr3:49451200-49466200	Weak transcription	Psoas Muscle	Psoas
20	chr3:49451400-49454200	Weak transcription	K562	blood
21	chr3:49451400-49454600	Weak transcription	Fetal Heart	heart
22	chr3:49451400-49459400	Weak transcription	Ovary	ovary
23	chr3:49451600-49454600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr3:49451600-49458000	Strong transcription	NHLF	lung
25	chr3:49451600-49458200	Strong transcription	Fetal Intestine Small	intestine
26	chr3:49451800-49455600	Genic enhancers	Fetal Muscle Trunk	muscle
27	chr3:49452000-49454000	Strong transcription	A549	lung
28	chr3:49452000-49454200	Genic enhancers	Duodenum Mucosa	Duodenum
29	chr3:49452000-49454800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr3:49452000-49455000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr3:49452000-49455000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr3:49452000-49455000	Strong transcription	Placenta Amnion	Placenta Amnion
33	chr3:49452000-49455200	Strong transcription	Brain Germinal Matrix	brain
34	chr3:49452000-49455400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr3:49452000-49455400	Strong transcription	Cortex derived primary cultured neurospheres	brain
36	chr3:49452000-49455400	Strong transcription	Osteobl	bone
37	chr3:49452000-49457400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr3:49452000-49458200	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr3:49452200-49454000	Strong transcription	Duodenum Smooth Muscle	Duodenum
40	chr3:49452200-49454200	Strong transcription	Gastric	stomach
41	chr3:49452200-49454600	Strong transcription	Colon Smooth Muscle	Colon
42	chr3:49452200-49454800	Strong transcription	Colonic Mucosa	Colon
43	chr3:49452200-49454800	Strong transcription	Esophagus	oesophagus
44	chr3:49452200-49455200	Genic enhancers	Rectal Mucosa Donor 29	rectum
45	chr3:49452200-49455400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr3:49452200-49455400	Strong transcription	Aorta	Aorta
47	chr3:49452200-49455400	Strong transcription	Brain Anterior Caudate	brain
48	chr3:49452200-49457800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr3:49452200-49458000	Strong transcription	Fetal Intestine Large	intestine
50	chr3:49452400-49454000	Strong transcription	HUES6 Cell Line	embryonic stem cell

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