Variant report

Variant	rs11711485
Chromosome Location	chr3:49491983-49491984
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:49491388..49494409-chr3:49505891..49508605,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000173402	Chromatin interaction

Extended variants
information (count: 126 )
Associated
traits (count: 15 )

rSNPs within LD-proxies of this variant (count:125)

rs_ID	r²[population]
rs10212296	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1050088	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1050450	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10640	0.93[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.87[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10865955	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11130192	1.00[JPT][hapmap]
rs11130193	0.83[ASN][1000 genomes]
rs11130196	0.90[ASN][1000 genomes]
rs11130199	0.93[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11130202	0.82[ASN][1000 genomes]
rs11130203	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11706370	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11708955	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11709525	0.95[CEU][hapmap];0.85[CHD][hapmap];0.94[GIH][hapmap];0.86[JPT][hapmap];0.89[LWK][hapmap];0.94[MEX][hapmap];0.80[MKK][hapmap]
rs11711536	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11712569	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11713474	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11715915	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.91[YRI][hapmap];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11716974	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11719996	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11720264	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11720597	0.81[EUR][1000 genomes]
rs11919311	0.88[GIH][hapmap];0.86[JPT][hapmap]
rs11922013	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11926781	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12330269	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12489092	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs13062429	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13078949	0.85[GIH][hapmap]
rs13079082	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13079643	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13086611	0.84[AMR][1000 genomes]
rs13087851	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs13090388	0.89[AMR][1000 genomes]
rs1464566	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1464567	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1464568	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1568661	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs17080528	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.88[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17650792	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1800668	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1801143	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.90[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1873625	0.95[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.82[TSI][hapmap]
rs1873626	0.86[JPT][hapmap]
rs1987628	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2172252	0.95[CEU][hapmap];0.86[JPT][hapmap]
rs2312461	0.82[ASN][1000 genomes]
rs2329020	0.85[GIH][hapmap];0.86[JPT][hapmap]
rs34196454	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34293138	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34363169	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34427167	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34588335	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34762726	0.95[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.89[LWK][hapmap];0.94[MEX][hapmap];0.80[TSI][hapmap]
rs35115732	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35169793	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35261698	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35701831	0.86[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs35999162	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3811697	0.95[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.89[MEX][hapmap];0.90[MKK][hapmap];0.90[TSI][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3811699	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.88[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3870337	0.82[ASN][1000 genomes]
rs3870338	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs3877784	0.82[ASN][1000 genomes]
rs3924462	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs3926569	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4283605	0.95[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.89[LWK][hapmap];0.94[MEX][hapmap];0.80[TSI][hapmap]
rs4625	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];0.90[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4855836	0.82[ASN][1000 genomes]
rs4855839	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855842	1.00[JPT][hapmap]
rs4855852	0.88[GIH][hapmap];0.86[JPT][hapmap]
rs4855859	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs4855861	0.82[ASN][1000 genomes]
rs4855864	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs4855866	0.92[ASN][1000 genomes]
rs4855873	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855877	1.00[JPT][hapmap]
rs59152804	0.86[ASN][1000 genomes]
rs6446264	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6446272	0.89[CEU][hapmap];0.86[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.85[TSI][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6446277	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67216675	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67485053	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6766131	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];0.90[TSI][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6766581	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6770670	0.95[CEU][hapmap];0.86[JPT][hapmap]
rs6779524	0.95[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.88[TSI][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6782577	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs6784820	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs6793308	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6797664	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6803222	0.94[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];0.81[TSI][hapmap]
rs6809216	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6997	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.88[TSI][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs71324962	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71615484	0.80[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7622302	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.83[MKK][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7623659	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7630869	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7633271	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7637999	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7643845	0.82[ASN][1000 genomes]
rs7645445	0.90[ASN][1000 genomes]
rs7646366	0.93[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.88[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7648841	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs885592	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9811982	0.95[CEU][hapmap]
rs9812791	0.95[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.89[LWK][hapmap];0.94[MEX][hapmap];0.80[TSI][hapmap]
rs9814873	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9818590	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9821311	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9827021	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9827708	0.95[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.89[LWK][hapmap];0.94[MEX][hapmap];0.82[TSI][hapmap]
rs9837027	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];0.90[TSI][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9837341	0.95[CEU][hapmap];0.86[JPT][hapmap]
rs9841110	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9850072	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9853683	0.85[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9858280	0.95[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];0.90[TSI][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9858418	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9859556	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9871380	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9875617	0.93[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes]
rs9878943	0.81[YRI][hapmap];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834687	chr3:49448632-49631788	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases

mRNA abundance (count:15)

SNP	Gene	Cis/trans	Tissue	Source
rs11711485	RNF123	cis	parietal	SCAN
rs11711485	IP6K2	cis	cerebellum	SCAN
rs11711485	CISH	cis	parietal	SCAN
rs11711485	NICN1	cis	cerebellum	SCAN
rs11711485	IHPK2	Cis_1M	lymphoblastoid	RTeQTL
rs11711485	GPX1	cis	parietal	SCAN
rs11711485	RBM6	cis	cerebellum	SCAN
rs11711485	NBEAL2	cis	cerebellum	SCAN
rs11711485	FAM212A	cis	Muscle Skeletal	GTEx
rs11711485	RNF123	cis	cerebellum	SCAN
rs11711485	ZNF589	cis	parietal	SCAN
rs11711485	PARP3	cis	parietal	SCAN
rs11711485	C3orf54	cis	cerebellum	SCAN
rs11711485	AMT	cis	parietal	SCAN
rs11711485	RBM6	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49481800-49492400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:49482000-49498200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr3:49484600-49492400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr3:49486600-49498600	Weak transcription	Duodenum Mucosa	Duodenum
5	chr3:49486800-49492000	Weak transcription	Fetal Kidney	kidney
6	chr3:49486800-49492000	Weak transcription	Stomach Smooth Muscle	stomach
7	chr3:49486800-49492200	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr3:49486800-49492400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr3:49487000-49492200	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr3:49487000-49492200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr3:49487000-49492400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr3:49490200-49494200	Enhancers	Fetal Muscle Trunk	muscle
13	chr3:49490600-49492000	Weak transcription	Stomach Mucosa	stomach
14	chr3:49490600-49506600	Enhancers	Fetal Muscle Leg	muscle
15	chr3:49491200-49495000	Enhancers	Hela-S3	cervix
16	chr3:49491400-49492400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr3:49491400-49493400	Enhancers	HepG2	liver
18	chr3:49491400-49494200	Enhancers	Right Ventricle	heart
19	chr3:49491800-49492400	Enhancers	Skeletal Muscle Male	skeletal muscle
20	chr3:49491800-49492600	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr3:49491800-49492800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr3:49491800-49493000	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr3:49491800-49493000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr3:49491800-49493000	Enhancers	Pancreas	Pancrea
25	chr3:49491800-49493800	Enhancers	Skeletal Muscle Female	skeletal muscle
26	chr3:49491800-49494400	Enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr3:49491800-49495000	Enhancers	HSMMtube	muscle
28	chr3:49491800-49506200	Enhancers	Placenta	Placenta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links